Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0380 ATGCACACCATGCTTTCTTCTATCTCAGACGTCTATAAATCCCACCCTCTCTTCCTTCACCACAAAAACCCCGACTTACATTCCCTTCAGGAGCTCCCCGATTCCTACGCGTGGGCCCCATCTCTCGAAGattcccaccaccaccaccacggcCATACCCTTTCCCCCGGGGACGACGTCGTCCCGCCCGTTATCGACCTCGAGGATCCAAATGCTTGCGTCCTCATAGGCCATGCATGCAAGACATGGGGGGTGTTCCAAGTGGTCAACCACGGCGTCCCCGGGAGGCTCCTGGACGACGTCGAGTTTGCCGGCAAGTCCCTCTTCTCCCTCCCTCCCCAGCAAAAGCTCAAGGCCGCCCGCTCCCCCGACGGAGCCGCCGGATACGGCATCGCCCGTATATCCTCGTTCTTCTCCAAGCTCATGTGTGATGTTGTCGTGGAGTACGAAGAAGCCATGAAAGCGCTAGCCGAGAAGCTGACGTGGCTCGTCTTGGCTTCCTTGGGCATTTCCAAACAAGACATCCAATGGGCCGCCGCCGGCCCAAACAACAACGGGCAGGACAATCTCAAGGACGCTTCTGCGGTCCTGCAGCTCAACTTCTACCCGACCTGCCCGGACCCGGAGCGTGCGATGGGCCTGGCCGCCCACACGGACTCCACCCTCCTCACGATCCTCTACCAGAGCGCCATCAGCGGGCTGCAGGTGTCCAAGGAGGGGGCCGGGTGGGTCACCGTGCCGCCCATCCCGGGCGGGCTGGTGATCAACATGGGGGACCTGATGCACATTTTGTCGAACGGGTTGTACCCGAGCGTGACACACCGGGTTATGGTGAATCGGACCCAGCAGAGGCTCTCGGTGGCTTATCTCTATGGGCCCCCAACGAGTGTGCTGATATCGCCACATCCAAAGGTGGTAGGCCCAAGTAGACCCgccctgtatcgggccgtgacGTGGCATGAGTATCTGGGCACTAAAGCGAAGCATTTCAATAAGGCGCTCTCTTGCGTTCAGCTCTGTGCACCCCAAAACGCAATGTTTGCTGAAGGAAACGACAATCACAAGAATGATAAtagtaataacaataacaatagtGTACAAGTGGGTTAG 1110 0.5514 MHTMLSSISDVYKSHPLFLHHKNPDLHSLQELPDSYAWAPSLEDSHHHHHGHTLSPGDDVVPPVIDLEDPNACVLIGHACKTWGVFQVVNHGVPGRLLDDVEFAGKSLFSLPPQQKLKAARSPDGAAGYGIARISSFFSKLMCDVVVEYEEAMKALAEKLTWLVLASLGISKQDIQWAAAGPNNNGQDNLKDASAVLQLNFYPTCPDPERAMGLAAHTDSTLLTILYQSAISGLQVSKEGAGWVTVPPIPGGLVINMGDLMHILSNGLYPSVTHRVMVNRTQQRLSVAYLYGPPTSVLISPHPKVVGPSRPALYRAVTWHEYLGTKAKHFNKALSCVQLCAPQNAMFAEGNDNHKNDNSNNNNNSVQVG 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0380 369 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 5 142 - -
Sto9g0380 369 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 144 344 - -
Sto9g0380 369 Gene3D - 25 324 IPR027443 -
Sto9g0380 369 Pfam 2OG-Fe(II) oxygenase superfamily 196 293 IPR044861 -
Sto9g0380 369 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 144 344 - -
Sto9g0380 369 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 5 142 - -
Sto9g0380 369 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 192 293 IPR005123 -
Sto9g0380 369 Pfam non-haem dioxygenase in morphine synthesis N-terminal 63 132 IPR026992 -
Sto9g0380 369 SUPERFAMILY Clavaminate synthase-like 20 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0380 Sto-Chr9 3694222 3695770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0380 76 334 Glycosyltransferase AT5G59530 27.336 9.10e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0380 K04124 - jre:108996105 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0380 9 3694222 3695770 Sto1g0209 1 1539202 1540547 CCT
Sto9g0380 9 3694222 3695770 Sto9g0380 9 3694222 3695770 ECH