Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0209 ATGCCTTCCCTCTCTGAGGCCTTTCGTTCCCACCCCGTCTTCCTCCACCACAAGCACCCTGATTTCACCTCCCTTCACGAACTCCCCGACTCCTACGCATGGAATACGACGTCGTCTCCTTCTCCTCAGCCTCCATCTCAACGTCTTCAACACGACGACGTCGTTCCCGTGGTGGATCTCTTGGACCCAAATGCCCCTTCCTCCATTGCCCATGCATGCAAATCCTGGGGTGCCTTCCACGTCATCAACCACGGCATCCCCAATTCCCTCCTCCGCGACATTGAATCCGCCGGCTCCGCCCTCTTCTCCCTCCCTCCCTCACACAAACTCCGCGCTGCCCGCCCCCCCGACGGCGTCTCCGGCTACGGCCTCGCTCGCATCTCCTCCTTCTTCCCCAAACTCATGTGGTCCGAAGGCTTCACCATCCTCGGCTCCCCCCTCCACCATTTTCGCCAACTCTGGCCTCATGATTACATCACTTActgTGATATAGTGGAGCGCTATGAAGCGGCAATGAAAAAGCTAGCGGGAAAGCTAATGCGGCTACTCTTAGCCTCGCTGGGTATTTCCCAGGCCGACCTCCAATGGGCCGGGCCCAGAGGCGACTTCCACGGGGCTTCTGCTGCATTACAGCTAAACTCCTACCCGGCTTGCCCTGACCCGGACCGGGCCATGGGCCTCGCAGCCCACACCGACTCCACCCTCCTCACGATCCTCCACCAAAACAACATCAGCGGCCTCCAGGTGTTGAAAGAAGGGACCGGGTGGGTGACGGTGGAACCCCTCCCCGGTGCGCTCGTCGTGAACATGGGGGACCTGCTCCACATTCTCTCGAACGGGTCGTACCCGAGCGTGCTCCACCGGGTGATGGTGAACCGGACGCGGCAACGGTTCTCGGTTGCTTATCTGTATGGGCCCCCAGGGAATGTGAAGATCTCACCACATCCGAAGCTGGTAGGCCCAAGTCGGCCCGCTTTATATAGACCGGTGacgtggaacgagtaccttggGACCAAAGCAAAACACTTCAACGAAGCACTGTCTTGGGTTCAGCTTTGTGCACCCAAGAACAACAAATTGTTCGATGTTGTTGTAAACGAAAATAACAGTGTTCAAGTGGGCTag 1125 0.5689 MPSLSEAFRSHPVFLHHKHPDFTSLHELPDSYAWNTTSSPSPQPPSQRLQHDDVVPVVDLLDPNAPSSIAHACKSWGAFHVINHGIPNSLLRDIESAGSALFSLPPSHKLRAARPPDGVSGYGLARISSFFPKLMWSEGFTILGSPLHHFRQLWPHDYITYCDIVERYEAAMKKLAGKLMRLLLASLGISQADLQWAGPRGDFHGASAALQLNSYPACPDPDRAMGLAAHTDSTLLTILHQNNISGLQVLKEGTGWVTVEPLPGALVVNMGDLLHILSNGSYPSVLHRVMVNRTRQRFSVAYLYGPPGNVKISPHPKLVGPSRPALYRPVTWNEYLGTKAKHFNEALSWVQLCAPKNNKLFDVVVNENNSVQVG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0209 374 Pfam 2OG-Fe(II) oxygenase superfamily 210 306 IPR044861 -
Sto1g0209 374 Pfam non-haem dioxygenase in morphine synthesis N-terminal 56 155 IPR026992 -
Sto1g0209 374 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 202 306 IPR005123 -
Sto1g0209 374 Gene3D - 21 337 IPR027443 -
Sto1g0209 374 SUPERFAMILY Clavaminate synthase-like 15 343 - -
Sto1g0209 374 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 3 355 - -
Sto1g0209 374 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0209 Sto-Chr1 1539202 1540547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0209 44 335 Glycosyltransferase AT5G59530 30.195 3.62e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0209 K04124 - jre:108996105 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0380 9 3694222 3695770 Sto1g0209 1 1539202 1540547 CCT
Sto1g0209 1 1539202 1540547 Sto1g0209 1 1539202 1540547 ECH