Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0274 atggCATCTCGCAGACAAATTGCTTCCATGAAACAATCCCTCTTCGATCAGGGATATCTGGATGAACAGTTCATTCAACTGGAGGAATTGCAGGATGATGCTAACCCTAATTTTGTTGAAGAAATCGTCACTCTTTACTACCGCGATTCTTCAAGACTTATATCCAGCATGGACCAGGCATTGGAGAGGCATCCACTGGAATTCAATAGGCTAGACACTATTATGCATCAGTTCAAAGGAAGCAGCTCAagCATCGGAGCCAAGAAAGTGAAAGCAGAGTGCACTCTGTTTAGGGAATATTGCAGGGCAGGAAATGCTGAAGGATGCAAGAGGAGCTTCCAACAATTGAAGAGAGAATATGCAACACTGAGAAAGAAACTAGAAGCTTATTTTCAGctaGCTAGGCAAGCTGGGCCCCATGAGACAGCATGTCGCCCCAAGTAA 444 0.4369 MASRRQIASMKQSLFDQGYLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLISSMDQALERHPLEFNRLDTIMHQFKGSSSSIGAKKVKAECTLFREYCRAGNAEGCKRSFQQLKREYATLRKKLEAYFQLARQAGPHETACRPK 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0274 147 PANTHER - 2 143 IPR045871 GO:0000160|GO:0009927|GO:0043424
Sto9g0274 147 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 2 143 - -
Sto9g0274 147 Gene3D HPT domain 2 142 IPR036641 GO:0000160
Sto9g0274 147 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 35 130 IPR008207 GO:0000160
Sto9g0274 147 Coils Coil 106 133 - -
Sto9g0274 147 Pfam Hpt domain 41 124 IPR008207 GO:0000160
Sto9g0274 147 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 4 136 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0274 Sto-Chr9 2578512 2580195 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0274 K14490 - gmx:100794149 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0274 9 2578512 2580195 Sto1g0303 1 2334125 2335873 CCT
Sto9g0274 9 2578512 2580195 Sto1g0303 1 2334125 2335873 ECH
Sto9g0274 9 2578512 2580195 Sto9g0274 9 2578512 2580195 ECH
Sto9g0274 9 2578512 2580195 Sto5g0661 5 4458976 4460948 ECH