Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0661 ATGAACAAGGCTCAACTCCGACGACAGGCTGctcacatgcgaaagtcactCTTTGACAAGGGGTACCTTGACGAACAGTTTATTGAGCTGGAGGAATTGCAAGACGATGCTAATCCCAATTTTGTGGAGGAAATTGTCACAGTATTCTACAATGACACTGCTAGACTCATCACCAACTTAGAACATGAATTGAGGAGTAGTCCAATGGATTTCGAGAAGCTGGATGATTACATGCATCAATTTAAGGGTAGCAGCTCCggCATCGGAGCTAAGAAGGTGAAGAATGAATGCAGCAGATTCAGTGAATGTTGTACAGCCAGAGACGCTGAAGgGTGCTTTAGGACTTTCCAGCGTGCAAAGCAGGAGTataaaactttgaagaccaagcTTGAAGCATATTTTCAGTTAGCAAGGGAAGCTGCACAAGACTAG 432 0.4005 MNKAQLRRQAAHMRKSLFDKGYLDEQFIELEELQDDANPNFVEEIVTVFYNDTARLITNLEHELRSSPMDFEKLDDYMHQFKGSSSGIGAKKVKNECSRFSECCTARDAEGCFRTFQRAKQEYKTLKTKLEAYFQLAREAAQD 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0661 143 Gene3D HPT domain 2 143 IPR036641 GO:0000160
Sto5g0661 143 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 2-LIKE 3 141 - -
Sto5g0661 143 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 5 138 IPR036641 GO:0000160
Sto5g0661 143 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Sto5g0661 143 Coils Coil 116 136 - -
Sto5g0661 143 PANTHER - 3 141 IPR045871 GO:0000160|GO:0009927|GO:0043424
Sto5g0661 143 Pfam Hpt domain 44 111 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0661 Sto-Chr5 4458976 4460948 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0661 K14490 - vvi:100252462 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0661 5 4458976 4460948 Sto5g0661 5 4458976 4460948 ECH
Sto9g0274 9 2578512 2580195 Sto5g0661 5 4458976 4460948 ECH
Sto1g0303 1 2334125 2335873 Sto5g0661 5 4458976 4460948 ECH