Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0235 ATGGGTTTCGTCCGGTGGATATGTACGGTCATTATCTTCCATTTCTTTGCTGCAACACCCATCTCCTCGGACCCCTCCTTCAGCTCAAACGAGCTCTCGTCGCTGCCCACCAAGTTCCTAAATTTCGCCAAGAAGCCTGAGGTTTTCGATTGGATGGTCGCAATCAGAAGGAAGATTCATGAGAATCCAGAATTAGGTTACGAGGAATTTCAGACCAGTGAGCTTATTAGAGCAGagttggataaattggatatttCTTATAAATATCCAGTTGCAGTCACCGGTGTTATTGGCTATATAGGGACTGGACGGCCTCCATTTGTGGCTTTAAGAGCTGACATGGATGCTCTTGCTATGCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCATGCTTGTGGACATGATGCTCATGTTAGTATGCTTCTAGGTGCTGCAAAGATCCTCAAAGAGCATGAAAAAGAGATACAGGGAACTGTTGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGGTGGAGGGGCTAAGAAAATTTTAGCTTCTAAAGCCTTGGAAAATGTCTCTGCTATCTTTGGATTGCACGGTGGAACAAACATACCTATAGGTGAAGTGGCCTCTAGATCTGGTCCTATATTGGCAGGAAGTGGCTTCTTTGAAGCAGTAATTAGTGGAAAGGGAGGTCATGCAGCTATTCCTCAGCATTCCATAGACCCCATATTGGCGGCTTCCAATGTGATTGTTAGCTTACAACATCTTGTTTCTCGCGAGGCTGATCCTTTGGACTCTCAGGTTATCACAGGGCAAGCTGCTGTACAGAGGTGCAATGCAACAGTTAACTTTTTCGATGACGAGAAGCCCTTCTTCCCTGTTACCATCAACAATGCCAACCTGCACGAGCATTTTCAACGTGTTGCAGGGGATATGCTTGGGATAAAGAAAGTTAAAGAAATGCAGCCATTGATGGGAGCTGAGGACTTCTCATTCTATCAAGAGGTTTTGCCTGGTTACTTCTTCTTTGTCGGAATGAAGAATGATTCACTTGAACGAGTGGAACCATCACACTCACCTTATTTCAAAGTCAATGAAGATGTACTTCCTTATGGAGCTGCACTTCATGCATCATTAGCTACTAGTTATCTTCTCAAGATTCAGCAGGATGTAGAAGTAGTAGAAGGGAAATATCATGatgaattatga 1209 0.4342 MGFVRWICTVIIFHFFAATPISSDPSFSSNELSSLPTKFLNFAKKPEVFDWMVAIRRKIHENPELGYEEFQTSELIRAELDKLDISYKYPVAVTGVIGYIGTGRPPFVALRADMDALAMQEMVEWEHKSKVPGKMHACGHDAHVSMLLGAAKILKEHEKEIQGTVVLVFQPAEEGGGGAKKILASKALENVSAIFGLHGGTNIPIGEVASRSGPILAGSGFFEAVISGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVITGQAAVQRCNATVNFFDDEKPFFPVTINNANLHEHFQRVAGDMLGIKKVKEMQPLMGAEDFSFYQEVLPGYFFFVGMKNDSLERVEPSHSPYFKVNEDVLPYGAALHASLATSYLLKIQQDVEVVEGKYHDEL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0235 402 Gene3D Zn peptidases 267 402 - -
Sto9g0235 402 Gene3D Zn peptidases 24 250 - -
Sto9g0235 402 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 270 IPR017439 GO:0016787
Sto9g0235 402 PANTHER PEPTIDASE M20 FAMILY MEMBER 267 402 IPR017439 GO:0016787
Sto9g0235 402 TIGRFAM amidohydrolases: amidohydrolase 52 270 IPR017439 GO:0016787
Sto9g0235 402 PIRSF Amidohydrol_AmhX 37 283 IPR017439 GO:0016787
Sto9g0235 402 PIRSF Amidohydrol_AmhX 266 388 IPR017439 GO:0016787
Sto9g0235 402 PANTHER AUXIN CONJUGATE HYDROLASE 267 402 - -
Sto9g0235 402 PANTHER AUXIN CONJUGATE HYDROLASE 1 270 - -
Sto9g0235 402 SUPERFAMILY Bacterial exopeptidase dimerisation domain 217 270 IPR036264 -
Sto9g0235 402 Pfam Peptidase family M20/M25/M40 109 380 IPR002933 GO:0016787
Sto9g0235 402 SUPERFAMILY Zn-dependent exopeptidases 47 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0235 Sto-Chr9 2150122 2153891 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0235 K21604 K14664 gmx:100794121 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0235 9 2150122 2153891 Sto1g0352 1 2848589 2854223 CCT
Sto9g0235 9 2150122 2153891 Sto9g0235 9 2150122 2153891 ECH