Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0352 ATGGGTTTCTTCAAGTGGGTTAGTTTGatcttaacgtttttttgctttGCCACGACACCCATCTTCTCAGATTCCTCCTTGAGCTCACATGAAGTATTATCAGCAATACCCATCGAGTTTTTGAAATTTGCCAACAAGACTGAGGTTTTTGATTGGATGGTTGGGATTAGAAGGAAGATTCATGAGAACCCAGAATTGGGTTATGAGGAATTTGAGACTAGTGAGCTGATAAGAGCAAAATTGGACGAATTGGGTGTGCCTTATAGATACCCAGTAGCGGTCACTGGTGTTATTGGCTTCATAGGTACCGGACGGCCTCCTTTTGTTGCAATAAGAGCTGATATGGATGCTCTTGCTATGCAGGAAATGGTGGAGTGGGAACACAAGAGTAAAGTACCTGGAAAGATGCATGCTTGTGGACATGATGCTCATGTTTCTATGCTTCTTGGGGCTGCAAAGATCCTCAAAGAGCATGAAAAAGAGATAAAGGGAACAGTTGTTCTTGTTTTCCAACCGGCAGAGGAAGGAGGTGGAGGGGCCAAAAAAGTTTTAGATTCTGGAGCCTTAGAAAATGTGACTGCTATCTTTGGATTGCATATCACACCAACCTTAGCTATAGGTGAAGTGGCTTCTAGGTCTGGTCCCCTATTGGCAGGAAGTGGCTTCTTCGAAGCCGTAATTAGTGGAAAGGGAGGTCATGCAGCTATTCCTCAGCATACAATAGACCCCATTTTGGCAGCTTCTAATGTTATTGTTAGCTTACAACATCTTGTTTCTCGTGAGGCTGATCCACTTGATTCCCAGGTTGTGACAGTAGCAAAATTTCAAGGAGGTGGAGCATTCAATGTTATCCCAGATTCTGTCACAATTGGCGGCACTTTTCGAGCTTTTTCAAAAGAAAGCTTCATGCAACTAAGACAGAGGATTGAGCAGGTTATCACTGGTCAAGCTGCTGTGCAGAGGTGCAATGCAACAGTTAACTTTCTTGATAAAGAGAAACCCTACTTCCCTCCAACTGTAAATGATGGTGACTTGCATGACCATTTTCAACAAGTAGCCAGGGATTTGCTTGGCATTGATAAGGTCAAAGACATGAAACCATTGATGGGATCTGAGGACTTTGCATTCTATCAAGAGATGATTCCTGGTTACTTCTTCTTACTTGGAATGGAGAATGCATTGATCGAACGTCTTGAGTTTGTACACTCACCCTTTTTCAAAATCAATGAAGAAGTACTTCCTTATGGAGCTGCACTTCATGCATCGTTAGCTTCCAGTTATCTTAAAAAGCTTCATCAGGATGTGCCAGTGGCAGTTGACCTAGTCTTTCAGTATCCCAAAGCCTGGGATGCTATATCTAATAGAGCACCTATAGCATTAGAAATCTCTGAGCTTGGGATAGTAGTCTTTGTCTTGCACAATCCAAACTGCAAGTTCCCGGTGAACTTCAAACCATTGAGGCCCTTTTCTCCAGTCACTGAGATGGATCAGAGGAGCCATGTGACCACAGTGAAGTTCTGGAGAGGAATGCAGGACTCAGAAAGGAGGATGAAGTATTCATTTGATAGATCAAGCATTGCATTAGCTAGAAGTCTTCTTTCTGAATCACACATGCTCATAGTTCCCCACTCTGCTATCTGTAAATGA 1647 0.4256 MGFFKWVSLILTFFCFATTPIFSDSSLSSHEVLSAIPIEFLKFANKTEVFDWMVGIRRKIHENPELGYEEFETSELIRAKLDELGVPYRYPVAVTGVIGFIGTGRPPFVAIRADMDALAMQEMVEWEHKSKVPGKMHACGHDAHVSMLLGAAKILKEHEKEIKGTVVLVFQPAEEGGGGAKKVLDSGALENVTAIFGLHITPTLAIGEVASRSGPLLAGSGFFEAVISGKGGHAAIPQHTIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVTIGGTFRAFSKESFMQLRQRIEQVITGQAAVQRCNATVNFLDKEKPYFPPTVNDGDLHDHFQQVARDLLGIDKVKDMKPLMGSEDFAFYQEMIPGYFFLLGMENALIERLEFVHSPFFKINEEVLPYGAALHASLASSYLKKLHQDVPVAVDLVFQYPKAWDAISNRAPIALEISELGIVVFVLHNPNCKFPVNFKPLRPFSPVTEMDQRSHVTTVKFWRGMQDSERRMKYSFDRSSIALARSLLSESHMLIVPHSAICK 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0352 548 CDD M20_IAA_Hyd 53 428 IPR044757 GO:0009850|GO:0016787
Sto1g0352 548 Gene3D Zn peptidases 53 413 - -
Sto1g0352 548 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 4 1 433 - -
Sto1g0352 548 SUPERFAMILY Zn-dependent exopeptidases 48 429 - -
Sto1g0352 548 Pfam Peptidase family M20/M25/M40 110 424 IPR002933 GO:0016787
Sto1g0352 548 Pfam Peptidase dimerisation domain 219 315 IPR011650 -
Sto1g0352 548 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 433 IPR017439 GO:0016787
Sto1g0352 548 Gene3D - 218 336 - -
Sto1g0352 548 TIGRFAM amidohydrolases: amidohydrolase 53 415 IPR017439 GO:0016787
Sto1g0352 548 SUPERFAMILY Bacterial exopeptidase dimerisation domain 218 337 IPR036264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0352 Sto-Chr1 2848589 2854223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0352 K21604 K14664 mnt:21391499 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0235 9 2150122 2153891 Sto1g0352 1 2848589 2854223 CCT
Sto1g0352 1 2848589 2854223 Sto1g0352 1 2848589 2854223 ECH