Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0200 ATGCTTTTAAAGGAAGGCATGTCTCAAACAACTAAAGGAATTTGGATGGCAAGATGTGCTGGAATAGAGCCTTGTACAATTGTGATGGATTTGGAGGGCACAGATGGAAGAGAACGTGGAGAGGATGATACTGCATTTGAAAAGCAGAGTGCTCTTTTTGCTCTTGCTGTTTCAGACATTGTGCTAATAAACATGTGGTGCCATGACATTGGTCGTGAGCAAGCTGCAAATAAGCCTCTCTTGAAAACTGTCTTTCAGGTCATGATGAGATTGTTTAGCCCGCGCAAAACAACATTGTTGTTTGTCATACGTGATAAAACTAGAACACCCCTTGAAAATTTAGAACCTGTTTTGCGAGAAGATATTCAGAAGATATGGGACTCAGTTCCTAAGCCACAGTGTCACTTGGAAACTCCATTAAGTGAATTCTTTAATGTTGAAGTTGTTGCTCTCTCTAGtttcgaagaaaaggaagagCAATTTAGAGAGCAGGTTGCCGCCTTGAGGAAACGATTCCATCATTCTATAGCTCCTGGTGGGCTTGCAGGGGATCGACGTGGAGTCGTTCCTGCTTCCGGATTTTCTTTTAGTGCACAGGAAATTTGGAAAGTCATTAAGGAGAACAAGGATCTGGACCTTCCTGCCCATAAGGTCATGGTTGCTACTGTACGATGCGAAGAAATTGCCAATGAGAAGTATGCTGCTTTCACTGCAAATGAGGAGTGGTCTCAGTTGGAAGAGGCTGTGGAATCTGGCCCAATTCCTGGATTTGGCAAAAAGCTTAGTTCAATTCTTGGCTCTTGTCTGTCGGAGTATGATGCGGAAGCTACTTATTTCGATGAAGGTGTCAGATCTGCAAAACAAAAGCAGCTTCAAGAAAAATTGTTGCAACTTGTCCAACCAGCATTCCATTCTGTGCTGGGACATATAAGGTCTGGAATTCTGGATAAGTACAAGGAAGAACTTGAAAAGGCTTTGAAAGGAGGGGAAGGGTTTTCTGCTGCTTCTAATAAATGCATTGAATCTTGTATGGCTCAATTTGACCAAGCGTGTGCAGATGTAATTATTGAACAAGCAAACTGGGATACATCTAAAACAAGGGAGAAACTCCAGCGTGATATTGATGCACATGCTGCTTCTGTACGTGCAGCTAAGCTGTCTGAACTTACTTCCTCTTATGAGGAAAAATTGAAAGAGGCCTTATCTGGACCTACTGAAGCTCTTCTGGATGGAGCTAACAGTGATACATGGCCAAATATAAGGAATCTTCTTAAGCGCGAGACTGAATCTGGAGTGTCAGGCTTCTCAGCTGCTCTTTCTGGGTTCGACATGGATGAAGAAACCAGGCGGAATATGATTACAAGTTTAGAGGATTGTGCAAGGGGTATAGTAGAAGCAAAGGCTAAGGAAGAAGCTGGAAGAGTTCTAATCCGTATGAAGGACAGGTTTACAGTGTTGTTTAGCCATGATTCTGATTCAATGCCTCGTGTTTGGACGGGGAAGGAAGATATTCGAGCCATCACCAAGACCGCCCGCATTGCTTCCTTGAAGTTGCTATCTGTTATGGCCGCTATTCGTTTGGAAGATGCTGCTGACAGTATCGAGAAAACATTAGCAGTTGCATTGGTGGAATCTTCACCTAAAAAAGATAAGAGCGGCACAGCAGTTGATCCATTGGCTTCAAGCACCTGGAAAGAGATAACTTTGAAAACTAACTATGGCAAGAATCTTAACTTCCCATTTTCTTCGACTGAAATCATTATGCAGATTCCATCCTCTAAAACCTTGATCACACCTGTACAGTGCAAATCTTTGTGGAGGCAATTCAGGACAGAGACTGAGTACAGTGAGGCCAACAAGCGTAGTAACAACTGGTTACCTCCTCCATGGGCAATTGCTGCTTTGCTTGTTCTTGGATTTAACGAATTTATGACACTTCTAAGAAACCCCTTGTATGTGTTTTTCATCTTCGCTGGTTTTCTTCTCCTGAAAGCCCTATGGGTTCAGCTGGACATTTCGAATGAATTCAGCAATGGATTTGTTCCGGGAATGATAGCCTTGTCTATAAAGTTTCTTCCGACTGTCATAAACCTCGTCAGAAAACTAGCAGAGGAGGCACAGAGCCCTCCAACTGACAATCCTCAGAGAAATTCCTCAAAAAGCAATAAAAATTCTGTTACTGCTGGTAGTGAAACAACATCTAGTGCTTCATCAAATGTAACTTCTTCAGACAAAGAAACCAAAAATTCGGATTCACTGAAATGA 2265 0.4216 MLLKEGMSQTTKGIWMARCAGIEPCTIVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQCHLETPLSEFFNVEVVALSSFEEKEEQFREQVAALRKRFHHSIAPGGLAGDRRGVVPASGFSFSAQEIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYAAFTANEEWSQLEEAVESGPIPGFGKKLSSILGSCLSEYDAEATYFDEGVRSAKQKQLQEKLLQLVQPAFHSVLGHIRSGILDKYKEELEKALKGGEGFSAASNKCIESCMAQFDQACADVIIEQANWDTSKTREKLQRDIDAHAASVRAAKLSELTSSYEEKLKEALSGPTEALLDGANSDTWPNIRNLLKRETESGVSGFSAALSGFDMDEETRRNMITSLEDCARGIVEAKAKEEAGRVLIRMKDRFTVLFSHDSDSMPRVWTGKEDIRAITKTARIASLKLLSVMAAIRLEDAADSIEKTLAVALVESSPKKDKSGTAVDPLASSTWKEITLKTNYGKNLNFPFSSTEIIMQIPSSKTLITPVQCKSLWRQFRTETEYSEANKRSNNWLPPPWAIAALLVLGFNEFMTLLRNPLYVFFIFAGFLLLKALWVQLDISNEFSNGFVPGMIALSIKFLPTVINLVRKLAEEAQSPPTDNPQRNSSKSNKNSVTAGSETTSSASSNVTSSDKETKNSDSLK 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0200 754 MobiDBLite consensus disorder prediction 705 754 - -
Sto9g0200 754 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 6 214 - -
Sto9g0200 754 CDD GBP 8 172 - -
Sto9g0200 754 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 5 568 - -
Sto9g0200 754 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 588 731 - -
Sto9g0200 754 PANTHER PROTEIN SEY1 5 568 IPR008803 -
Sto9g0200 754 PANTHER PROTEIN SEY1 588 731 IPR008803 -
Sto9g0200 754 MobiDBLite consensus disorder prediction 708 746 - -
Sto9g0200 754 Coils Coil 151 171 - -
Sto9g0200 754 Pfam Sey1 three-helix bundle domain 256 705 IPR046758 -
Sto9g0200 754 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 1 185 IPR030386 GO:0005525
Sto9g0200 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 181 IPR027417 -
Sto9g0200 754 Gene3D - 1 183 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0200 Sto-Chr9 1784542 1791237 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0200 K22698 - gmx:100777656 1149.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0200 9 1784542 1791237 Sto1g0389 1 3169755 3177679 CCT