Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0389 ATGAAGGAGGTGAAATTGGGTGAATGTGGACTTTCATATGCTGTAGTTTCTATTATGGGTCCACAAAGTAGTGGTAAGAGCACACTGTTAAATCATTTGTTCAGAACTAACTTCAGGGAGATGGATGCTTTTAAAGGAAGGTCTCAAACAACTAAAGGAATTTGGATGGCTAGGTGTGCTGGCATAGAGCCTTGTACAATTGTGATGGATTTAGAGGGCACTGATGGAAGAGAACGTGGAGAGGACGATACTGCATTTGAAAAGCAGAGTGCTCTATTTGCTCTTGCTGTTTCAGACATAGTGCTAATAAACATGTGGTGTCATGACATAGGCCGTGAGCAAGCTGCAAATAAGCCTCTTTTGAAAACTGTCTTCCAGGTAATGATGAGACTGTTTAGTCCGCGCAAAACAACATTGTTGTTTGTCATTCGTGATAAAACAAGGACACCCCTTGAAAATTTAGAACCTGTTTTGCGAGAAGATATTCAGAAGATATGGGACTCTGTTCCTAAGCCACAAGCTCACAAGGAAACCCCACTAAGTGAATTCTTTAATGTTGAAGTTGTTGCTCTCTCTAGTTATGAAGAAAAGGAAGAGCAATTTAAGGAGCAGGTTGCCAGCCTGAGGCAACGATTCAATCATTCTATTGCTCCTGGTGGGCTTGCAGGGGATAGACGTGGAGTAGTTCCTGCTTCAGGATTTTCTTTCAGTTCACAGCAAATTTGGAGAGTCATTAAGGAGAACAAGGACCTTGATCTTCCTGCACACAAGGTCATGGTTGCTACTGTACGCTGTGAAGAAATTGCCAATGAGAAATATGCTGCTTTTACTGCAAATGAGGAATGGTGTCAGTTAGAAGATGCTGTCCAATCTGGCCCAATTCCTGGATTTGGGAGAAAGCTCAGTTCAATCCTTGACAATTGTTTATCAGAgTATGATGTAGAAGCCACTTATTTTGATGAAGGCGTCAGATCTGCAAAACAAAAGCAACTTCAAGAAAAACTGTTGCAACTTGTCCAACCAGCATTCCAATCTGCACTGGGACATATAAGATCTGGAACTTTTGATAAGTTTAAGGATGCATTTGACAAGGCTTTGAATGGAGGGGAAGGGTTTTCTGCTGCTTCTAATAAATGCACTGAATCTTGTATGGCTCAGTTCGATGAAGCATGTGCAGATGTAGTTATTGAAAAAGCAAACTGGGATACATCTAAAGTAAGGGAGAAACTGCGGCGTGACATTGATGCGCATGTTGCTTCTGTGCGTGCAGCTAAGCTGTCTGAATTAACTACATCATATGAGGAAAAACTAAAGGAGGCCTTATCTGGACCTGTTGAAGCTCTTTTAGATGGAGCCAACAGTGATACTTGGCCAACGATAAGAAAACTTCTCAAGCGTGAAGCTGAATCAGCTGTTTCAGGATTCTCTGATGCACTTTCTGGGTATGATATGGATGAAGAAACACGACAGAACATGATTACACATTTAGAGGACTATGCAAGGGGTGTGGTAGAAGCAAGGGCTAGGGAAGAAGCTGGAAGGGTTCTAATTCGTATGAAGGACAGGTTTACAACATTATTCAGCCGTGATTCTGATTCAATGCCTCGTATTTGGACGGGAAAGGAAGACATTCGAGCCATAACCAAGACTGCTCGCTCTTCTtCCTTGAAGTTGCTATCTGTTATGGCTGCAATTCGTTTGGATGATGAAGATGCTGATAATATTGAGAAAACATTAGCAGTAGCTTTGGTTGATTCATCAGGGAGTGCTGTTAAGGATAGGAGCATCGCAGTGGTTGATCCGTTGGCTTCGAGCACATGGGAAAAGGTTCCATCCTCAAAAACTTTGATCACACCTGTACAGTGCAAATCTTTGTGGAGGCAATTTAAGATGGAGACAGAATATAACGTCTCTCAGGCCATAGCTGCACAGGAGGCCAACAAGCGAAATAACAACTGGTTACCTCCTCCATGGGCAATTGTTGCTTTAATTGTTCTGGGATTTAATGAATTTATGACCCTTCTAAGAAATCCGTTTTATTTGGCTGTCATCTTTGTTGGTTTTCTCCTCGCAAAAGCCCTCTGGGTGCAGCTGGACATTTCTGGTGAATTCAGCAATGGAGCTCTTCCAGGACTTATATCCTTGTCAACCAAGTTTCTTCCAACTGTCATGAACATTATCAGAAAACTAGCAGAGGAGGCACAGAACCCTGGAACTAACAATCCTCAGAGAAACCAATCGAAAAGCAATAACACTGATCACGCTCGTACTGATATGTCATCGAATGCTTCGTCTACTGTAACTTCATCAGACAATGGAATTGAATTCTCCAGTCCATTAAAACAAGAGTAG 2352 0.4205 MKEVKLGECGLSYAVVSIMGPQSSGKSTLLNHLFRTNFREMDAFKGRSQTTKGIWMARCAGIEPCTIVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSYEEKEEQFKEQVASLRQRFNHSIAPGGLAGDRRGVVPASGFSFSSQQIWRVIKENKDLDLPAHKVMVATVRCEEIANEKYAAFTANEEWCQLEDAVQSGPIPGFGRKLSSILDNCLSEYDVEATYFDEGVRSAKQKQLQEKLLQLVQPAFQSALGHIRSGTFDKFKDAFDKALNGGEGFSAASNKCTESCMAQFDEACADVVIEKANWDTSKVREKLRRDIDAHVASVRAAKLSELTTSYEEKLKEALSGPVEALLDGANSDTWPTIRKLLKREAESAVSGFSDALSGYDMDEETRQNMITHLEDYARGVVEARAREEAGRVLIRMKDRFTTLFSRDSDSMPRIWTGKEDIRAITKTARSSSLKLLSVMAAIRLDDEDADNIEKTLAVALVDSSGSAVKDRSIAVVDPLASSTWEKVPSSKTLITPVQCKSLWRQFKMETEYNVSQAIAAQEANKRNNNWLPPPWAIVALIVLGFNEFMTLLRNPFYLAVIFVGFLLAKALWVQLDISGEFSNGALPGLISLSTKFLPTVMNIIRKLAEEAQNPGTNNPQRNQSKSNNTDHARTDMSSNASSTVTSSDNGIEFSSPLKQE 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0389 783 MobiDBLite consensus disorder prediction 733 783 - -
Sto1g0389 783 Pfam Sey1 three-helix bundle domain 296 733 IPR046758 -
Sto1g0389 783 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 1 780 - -
Sto1g0389 783 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 219 IPR027417 -
Sto1g0389 783 PANTHER PROTEIN SEY1 1 780 IPR008803 -
Sto1g0389 783 MobiDBLite consensus disorder prediction 734 783 - -
Sto1g0389 783 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 10 225 IPR030386 GO:0005525
Sto1g0389 783 Coils Coil 191 211 - -
Sto1g0389 783 CDD GBP 9 212 - -
Sto1g0389 783 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 19 254 - -
Sto1g0389 783 Gene3D - 4 218 IPR027417 -
Sto1g0389 783 Hamap Protein SEY1 [SEY1]. 1 735 IPR008803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0389 Sto-Chr1 3169755 3177679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0389 K22698 - gmx:100777656 1335.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0200 9 1784542 1791237 Sto1g0389 1 3169755 3177679 CCT