Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0199 ATGGCTTCAGTTGGTGCAGTCAAATTCTTGCTGTGCTTACTTCTATGCCTCTTCAACTCTCAAACTCTTTGTCAAGGTGAGAAGAACGACCGGTATGCGAATCGGTACTCATTCATCAAAAGGGCAAGCTCATtctcgtcgtcgtcgtcgtcgtcatcgTCGGTAATTTCAAGCACGGGAAGCAATGACGGTTACGATTACATAATAGTGGGAGGTGGAACGGCAGGATGCCCTTTGGGCGCGACGCTATCAGAGAAATTCAGAGTGTTAGTGCTGGAAAGAGGAGGCGTACCTTTCACCAATCCAAATGTGTCGTTTATGGAGAATTTTCACATTACCTTGGCAGATACTTCACCATCTTCACCTTCCCAATACTTCATTTCAACGGACGGTGTCCTTAATGCGAGGGCTAGGGTTCTTGGGGGTGGTACCTCCATTAATGCCGGCTTCTACACCAGAGCTAGCTCAAGATTCATAGAGAAAGTTGGGTGGGATGCGAAGATAGTGAACGAATCGTACCCTTGGGTTGAGAAGAAAATAGTGTACCGTCCGAAGATCGCACCGTGGCAAAGAGCAGTGAGGGATGGGCTTCTAGACGCCGGAGTCTCTCCTTTCAATGGCTTCACCTTCGATCACGTCCATGGAACCAAGGTTGGTGGCACCATTTTTGATCGATTTGGCCGACGCCATTCCGCCGCCCAACTTCTTGCTTCCGGGAACCctaaaaatctcaccgtcctcgTCTATGCCACCGTTCACAAGATTGTTTTTGACACAAGAGGCAAAATACCCAAAGCAGTGGGAGTTATTTTCAGAGATGAAAATGGGAAGCAGCATGAAGCAGTTCTGAGAAAGAGCAGGGAGAGTGAGGTGATAGTGAGTAGTGGGGCAATTGGGACACCTCAATTGCTAATGCTGAGTGGAATTGGGCCAAAAGATGAGCTTCAAAAATGGAACATCCCTGTGGTTCTTGACAACCCATATGTTGGGAAGGGGATGGCTGATAACCCATTGAACACCATTTTTGtgccttctagaaggccagtgaaGCAGTCACTCATAGAAACTGTGGGTATCACTAACAAGGGTGTCTACATTGAAGCTAGCAGTGGCTTTGGTCAGTCTAACGATAGCATCCATTGCCACCATGGTATCTTGTCAGCTGAGATTGGGCAGCTCTCCACAATCCCACCCAAGAAAAGATCAGCAGAAGCAGTTCAAGAATATCTGAAGGGAAAGCGAGAAATACCTGTTGAAGCATTCAGGGGAGGCTTCATCTTGTCAAAAGTAGCAAGCCCTTGGTCAACAGGAGAGCTCAAGCTGATGAACACCAATGTTGAAGACAACCCTTCTGTTACCTTCAACTACTTCAACCATCCATATGATCTCCAACGTTGTGTTGAGGGCATAAGAATAGCTACTAAGGTTGTCCAGTCAGAGCACTTCAGAAACTACACTTTGTGTGACAGACAAAGTACTGAGAATCTGCTTAATATGACAGTGAAGGCAAATGTCAACCTCGTACCCAAGCATGTGAATGACACAAAGTCACTAGAGCAATTCTGCAGAGATACTGTGATCACCATTTGGCATTACCATGGTGGGTGCCATGTGGGGAAGGTGGTTGGCTCTGATCATAAGGTTCTTGGTGTTCATGGACTCCGTGTGGTTGATGGCTCAACTTTTACTGAGTCACCTGGGACAAATCCTCAAGCCACTGTCATGATGATGGGAAGGTACATGGGAGTGAAGATTTTAAGAGATAGGTTGGGGAATTCGTCTGGTATATAA 1791 0.4472 MASVGAVKFLLCLLLCLFNSQTLCQGEKNDRYANRYSFIKRASSFSSSSSSSSSVISSTGSNDGYDYIIVGGGTAGCPLGATLSEKFRVLVLERGGVPFTNPNVSFMENFHITLADTSPSSPSQYFISTDGVLNARARVLGGGTSINAGFYTRASSRFIEKVGWDAKIVNESYPWVEKKIVYRPKIAPWQRAVRDGLLDAGVSPFNGFTFDHVHGTKVGGTIFDRFGRRHSAAQLLASGNPKNLTVLVYATVHKIVFDTRGKIPKAVGVIFRDENGKQHEAVLRKSRESEVIVSSGAIGTPQLLMLSGIGPKDELQKWNIPVVLDNPYVGKGMADNPLNTIFVPSRRPVKQSLIETVGITNKGVYIEASSGFGQSNDSIHCHHGILSAEIGQLSTIPPKKRSAEAVQEYLKGKREIPVEAFRGGFILSKVASPWSTGELKLMNTNVEDNPSVTFNYFNHPYDLQRCVEGIRIATKVVQSEHFRNYTLCDRQSTENLLNMTVKANVNLVPKHVNDTKSLEQFCRDTVITIWHYHGGCHVGKVVGSDHKVLGVHGLRVVDGSTFTESPGTNPQATVMMMGRYMGVKILRDRLGNSSGI 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0199 596 Gene3D - 65 578 IPR036188 -
Sto9g0199 596 SUPERFAMILY FAD-linked reductases, C-terminal domain 333 535 - -
Sto9g0199 596 SUPERFAMILY FAD/NAD(P)-binding domain 63 588 IPR036188 -
Sto9g0199 596 Gene3D - 182 528 - -
Sto9g0199 596 Pfam GMC oxidoreductase 433 579 IPR007867 GO:0016614
Sto9g0199 596 ProSitePatterns GMC oxidoreductases signature 2. 296 310 IPR000172 GO:0016614|GO:0050660
Sto9g0199 596 ProSitePatterns GMC oxidoreductases signature 1. 137 160 IPR000172 GO:0016614|GO:0050660
Sto9g0199 596 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 596 - -
Sto9g0199 596 PIRSF Alcohol_oxidase 39 596 IPR012132 GO:0050660
Sto9g0199 596 Pfam GMC oxidoreductase 65 337 IPR000172 GO:0016614|GO:0050660
Sto9g0199 596 PANTHER OSJNBA0019K04.7 PROTEIN 2 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0199 Sto-Chr9 1770372 1778838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0199 65 589 Miscellaneous Gene Families AT5G51950 52.453 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0199 K15403 - gmx:100784433 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0199 9 1770372 1778838 Sto1g0390 1 3189124 3204622 CCT
Sto9g0199 9 1770372 1778838 Sto9g0199 9 1770372 1778838 ECH