Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0390 ATGATCTGTTCTCTATTAGATTCTTCTCCAGTTTTGGGTGGTAGTAGTAGCAACAACAAGCAGAATTGGTACAAGTACAAGTACCCATTCATCAGAAGAGCAAGTTCattttcatcatcttcatcatcatcatcttcttcttcttcatcatcatcatcaacctcAAACAATGGGTTTGATTACATCATAGTGGGAGGTGGAACTGCAGGGTGCCCTCTGGCTTCAACTCTGTCCCAAAATTTCAGTGTTCTGCTTCTAGAAAGAGGGGGTGTCCCATTTTCAAACCCTAATGTGTCATTCCTGGAGAATTTCCACATCACATTGGCTGATACTTCACCTTCTTCAGCTTCTCAATACTTCATTTCCACTGATGGAGTCCTCAATGCCAGAGCTAGGGTTTTGGGAGGTGGCAGGTTCATAGAGAAAGTGGGATGGGATGCAAAATTGGTGAATGAATCATACCCTTGGATTGAGAAGCAGATAGTTCATCGTCCGCCTTTCTCCGCCTATCAGAGAGCTGTCAGGGATAGCCTTCTCGACGCCGGCGTCTCTCCCTTCAACGGCTTCACCTTCGATCATGTTTCCGGCACCAAGCTCGGCGGCACCATTTTCGACCGATTCGGTCGCCGCCACACTGCTGCCGAACTCCTTGCTTCCGCAAACCCTAACAATCTCACTGTTCTCATCTATGCCTCTGTCCACAAGATCGTTTTCGACACCAGAGGGAAAAGGCCAAGAGCCATAGGGGTTGTGTTCAAAGATGAAAATGGGAAGAGGCATCGGGCACTTCTGGGGAATGGAAGGCAGAGTGAAGTGATAGTGTCAAGTGGTGCAATAGGGACTCCTCAATTGCTAATGCTTAGTGGGATCGGTCCAAAACAAGAACTTCAAAGCTTGAATATACCTTTGGTTCTTCACAACCCCTTTGTTGGAAAAGGCATGGCTGATAATCCCATGAACACCATTTTTGTTCCTTCTAATAGGCCTATTCATCAGTCACTCATAGAGACTGTGGGTATCACTAAACTTGGTGTATACATTGAGGCTAGCAGTGGCTTTGGTCAATCCAACGAAAGCATTCATTGCCACCATGGAATCTTGTCTGCTGAGATTGGCCAGCTCTCCACAATCCCTCCCAAGCAAAGATCCCCAGAAGCTGTTAAAGCATTTGCCAAAACAAAGCGAGAACTCCCAGTTGAAGCATTCAGGGGAGGCTTCATCTTGTCAAAAGTAGCAAATCCTTGGTCAACAGGTGAGCTCAACTTAATCAACACCAACGTAGAAGACAACCCTTCTGTTACCTTCAACTACTTCAGCCACCCCTATGATCTCCATCGTTGTGTTGAGGGAATCAGAATAGCCACTAAGGTTGTGCAGTCAAAGCACTTCACAAACTACACCTTGTGTGACAGACAAACCACTGAGAAACTGCTTAACCTCACTGTGAAGGCCAATGTGAACCTCATACCAAAGCACCTCAATGACACTAAGTCACTGGAGCAGTTTTGTAGAGACACTGTGATCACAATCTGGCACTACCATGGTGGGTGCCATGTGGGCAAGGTGATTAATTCTGATTATAAGGTTCTTGGAGTTGAGAGACTTCGTGTGGTGGATGGCTCAACATTTACAGAGTCACCTGGGACTAATCCTCAAGCCACTGTCATGATGATGGGCAGGTACATGGGACTGAAGATTTTAAGAGATAGGTTGCACAAATCAGCTGTGAGAGGCTCTGAAGTAGAATGCCTTCTGAGTGACTCGCAATCCTGGCTCGATGTACCGAGAAGTTCCGATGCTGATAATGTTACCTTGATAAGCCAATCCCCGAGCTGCACCAAGTGCTATCTTCATCCGGGCATTCCAATCAAGTGGGTTAGTTTCCTTGTGAGCACCTGGGAATATAGATTGCTTTCAAAGAACTTACGGACATTGATCCGAGACCTGGCTTGCTCTTATAAGTCAACAACCTGGCAGACCCTGCTATTTGCAAATATGTTCTATATTTTAAGTGATGCAACCAAAGATGGGGGAAAAAGGCTCATGAACAAGAGAGCGACATCTCATCAGCCAAAGCCATGCAACTGCAACAAATATAAGAAAAGCCGAGGTGGAGGTGGCAGAATCAAAACAGAAGCTGGCGGTGGAGCCCTCATCTTCCTCAATGGTGAACCTTTAGGTGAAATTACAGCTGGTGATGGAGCAGGTGCAGGTAAATTCCAGCTCATTGGTGAAGAGAAAGGAGGAGCTTTAGTGAACGGCTTAGAAGGAGGGAGTGCAATACTTGAAGGAACTTCAAAAGATGACTTAGATGGCGGAACTGCAATGCTCGAATGGCTTCTAGAATGGTGTTGA 2355 0.4514 MICSLLDSSPVLGGSSSNNKQNWYKYKYPFIRRASSFSSSSSSSSSSSSSSSSTSNNGFDYIIVGGGTAGCPLASTLSQNFSVLLLERGGVPFSNPNVSFLENFHITLADTSPSSASQYFISTDGVLNARARVLGGGRFIEKVGWDAKLVNESYPWIEKQIVHRPPFSAYQRAVRDSLLDAGVSPFNGFTFDHVSGTKLGGTIFDRFGRRHTAAELLASANPNNLTVLIYASVHKIVFDTRGKRPRAIGVVFKDENGKRHRALLGNGRQSEVIVSSGAIGTPQLLMLSGIGPKQELQSLNIPLVLHNPFVGKGMADNPMNTIFVPSNRPIHQSLIETVGITKLGVYIEASSGFGQSNESIHCHHGILSAEIGQLSTIPPKQRSPEAVKAFAKTKRELPVEAFRGGFILSKVANPWSTGELNLINTNVEDNPSVTFNYFSHPYDLHRCVEGIRIATKVVQSKHFTNYTLCDRQTTEKLLNLTVKANVNLIPKHLNDTKSLEQFCRDTVITIWHYHGGCHVGKVINSDYKVLGVERLRVVDGSTFTESPGTNPQATVMMMGRYMGLKILRDRLHKSAVRGSEVECLLSDSQSWLDVPRSSDADNVTLISQSPSCTKCYLHPGIPIKWVSFLVSTWEYRLLSKNLRTLIRDLACSYKSTTWQTLLFANMFYILSDATKDGGKRLMNKRATSHQPKPCNCNKYKKSRGGGGRIKTEAGGGALIFLNGEPLGEITAGDGAGAGKFQLIGEEKGGALVNGLEGGSAILEGTSKDDLDGGTAMLEWLLEWC 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0390 784 Gene3D - 59 559 IPR036188 -
Sto1g0390 784 PANTHER OSJNBA0019K04.7 PROTEIN 19 573 - -
Sto1g0390 784 Gene3D - 163 509 - -
Sto1g0390 784 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 19 573 - -
Sto1g0390 784 SUPERFAMILY FAD/NAD(P)-binding domain 55 570 IPR036188 -
Sto1g0390 784 Pfam GMC oxidoreductase 414 560 IPR007867 GO:0016614
Sto1g0390 784 ProSitePatterns GMC oxidoreductases signature 2. 277 291 IPR000172 GO:0016614|GO:0050660
Sto1g0390 784 Pfam GMC oxidoreductase 206 318 IPR000172 GO:0016614|GO:0050660
Sto1g0390 784 SUPERFAMILY FAD-linked reductases, C-terminal domain 314 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0390 Sto-Chr1 3189124 3204622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0390 59 570 Miscellaneous Gene Families AT5G51950 52.075 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0390 K15403 - gmx:100788704 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0199 9 1770372 1778838 Sto1g0390 1 3189124 3204622 CCT