Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2513 CTGATTTGGGAGCAAGCTAGGGTTCCGGTGGTGGTTCCGGTGCTGaagatgatggtgatggtgtGCCTCGCGATGTCGGCGATGCTGTTCGCGGAGAGAGTGTATATGGGAATTGTGATTGTGGTGGTGAGATTGTTTGGGAGAAAACCTGAAAAGCGCTATAAATGGGAGGCGTTCGAAGATAATAATAGTAGTAATAGTGATGTTGAGCTCGGCAATGCTCGCTATCCCATGTTACGTTGGGCGCAGGTGTACCAGTTATCAATAGGAGCAGCATGTGGGCTATCATGGCCAAGTGATAGGATTATCATTCAAGTTCTTGATGACTCCACTGATCCTCTCATTAAGAAATTAGTGGAGAGTGAATGCAAGAGATGGGAGAGCAAAGGAATAAACATAAAGTATGAAATAAGAGAGAACAGAAAAGGGTACAAAGCAGGGGCTCTTAAAGAAGGCATGAAGCACAGCTATGTCCAACTATGTGATTATGTCGCCATCTTCGATGCCGACTTTCAGCCTGATCCTGATTTTCTCACTCGCACCATTCCCTTCCTCTTTCACAACCCACAAATTGCTCTCGTCCAAGCTCGTTGGAAATTTGTAAATGCTGATGAATGCCTAATGACTAGAATGCAAGAAATGTCATTGGACTACCATTTCATTGTTGAGCAGGAAGTGGGGTCCTCAACCTATGCTTTCTTTGGTTTCAATGGCACAGCAGGTGTTTGGAGGCTTTCTGCACTAAATGAGGCTGGAGGATGGAAGGACAGAACTACAGTTGAAGACATGGACTTGGCCGTCCGAGCCGGTCTCAAGGGCTGGAAATTTTTGTACCTCGGTGACCTAAAGGTTAAAAACGAATTACCAAGTACCTTTAAGGCCTACCGATATCAGCAACACAGATGGTCTTGTGGCCCTGCTAATCTCTTCAGGAAGATGGCAATGGAGATCCTAAGAAACAAGAAAGTATCAATGTCGAAGAAGGTCCATGTTATTTACAGCTTTTTCTTCGTCCGGAAGATTGTAGCCCATGTGGTTACATTTCTGTTTTACTGTGTTGTTTTGCCTGCAACCGTTCTAGTTCCTGAGGTGCAAGTTCCAAAGTGGGGTGCTGTTTATATACCTTCCACCATTACTCTCCTTAATGCTGTAGGAACTCCAAGATCACTCCACCTCCTTGTATTCTGGATCCTATTTGAAAATGTCATGTCGATGCATCGGACTAAGGCAACAATCATAGGTTTGCTGGAGGCAGGGAGAGCCAACGAATGGGTGGTCACAGAGAAATTGGGAGATGCTCTCAAAACAAAATCAGGAGGAAAAGCACCAAGGAAGCCTCGTGTAAGGATCGGCGAAAGAATCCATTTGCTGGAACTTGGTGTTGGGGCATACCTCTTCATCTGTGGATGCTATGATCTAACCTTTGGGAAGAATCAATACTTCATATACCTCTTCCCGCAATCTCTTGCCTTCTTTGTCGCAGGAGTTGGCTACATTGGTGTCTTTGTTCCCAATTCTTAG 1521 0.4458 LIWEQARVPVVVPVLKMMVMVCLAMSAMLFAERVYMGIVIVVVRLFGRKPEKRYKWEAFEDNNSSNSDVELGNARYPMLRWAQVYQLSIGAACGLSWPSDRIIIQVLDDSTDPLIKKLVESECKRWESKGINIKYEIRENRKGYKAGALKEGMKHSYVQLCDYVAIFDADFQPDPDFLTRTIPFLFHNPQIALVQARWKFVNADECLMTRMQEMSLDYHFIVEQEVGSSTYAFFGFNGTAGVWRLSALNEAGGWKDRTTVEDMDLAVRAGLKGWKFLYLGDLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMAMEILRNKKVSMSKKVHVIYSFFFVRKIVAHVVTFLFYCVVLPATVLVPEVQVPKWGAVYIPSTITLLNAVGTPRSLHLLVFWILFENVMSMHRTKATIIGLLEAGRANEWVVTEKLGDALKTKSGGKAPRKPRVRIGERIHLLELGVGAYLFICGCYDLTFGKNQYFIYLFPQSLAFFVAGVGYIGVFVPNS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2513 506 SUPERFAMILY Nucleotide-diphospho-sugar transferases 87 334 IPR029044 -
Sto8g2513 506 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 81 286 IPR029044 -
Sto8g2513 506 CDD CESA_CaSu_A2 77 306 - -
Sto8g2513 506 Pfam Glycosyl transferase family group 2 163 353 IPR001173 -
Sto8g2513 506 PANTHER - 1 505 - -
Sto8g2513 506 PANTHER BNAC09G36340D PROTEIN 1 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2513 Sto-Chr8 17415982 17421888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2513 1 505 Miscellaneous Gene Families AT5G03760 75.828 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2513 K13680 - rcu:8267806 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2513 8 17415982 17421888 Sto13g3114 13 35526160 35529843 CCT