Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3114 ATGGATCCGCTTTCATCAACCACTATGCTTCCTGATGCGTTTCAAGGGGCAAGAGACGACATTAGCCTCCAACTTGGGTTGATTTGGAGTCAAATCAAAGCCCCATTAGTGGTTCCACTGCTGAGAATCGCAGTGGTTTTGTGCTTGATCATGTCGTTGTTGATGTTCATTGAGAGGGTGTACATGTGCATTGTCATTACTCTGGTGAAGCTGTTTGGGAGAAAGCCAGAGAAGCGTTATAAATGGGAGCCAATGAAGGATGACGTAGAGTTGGGAAACTCTGCTTATCCAATGGTTCTCGTTCAAATTCCAATGTACAACGAAAGAGAGGTTTATCATTTGTCAATTGGAGCTGCGTGTGGACTTTCATGGCCTTCAGATAGGATCATAATACAAGTCTTGGACGATTCAACTGACCCAACGATTAAGGGGCTGGTGGAGGTAGAATGCCAAAGATGGGCAAGCAAAGGGATAAACATAAAGTACGAGATTAGAGACAACAGAAATGGGTATAAGGCAGGGGCTCTGAAAGAGGGGATGAAACGAAGCTACGTGAAACAATGTGATTTCGTTGCCATTTTCGATGCTGATTTCCAACCAGAGCCTGATTTCTTGTGGCGCACTATCCCTTTCCTTGTGCACAATCCTGAACTCGCTCTCGTTCAGGCTCGCTGGAAGTTTGTGAACTCGGATGAATGTTTGATGACGAGGATGCAAGAGATGTCACTGGATTATCATTTTACTGTGGAGCAAGAAGTGGGGTCTTCCACTTACGCTTTCTTTGGGTTTAACGGGACTGCGGGAGTATGGAGAATTTCGGCGCTGAATGAGGCTGGTGGGTGGAAGGATCGGACCACTGTGGAAGATATGGACCTGGCAGTGCGAGCCAGTCTCAAAGGATGGAAATTCCTTTACTTGGCCAATTTAAAGGTTAAAAACGAATTGCCAAGCACTTTCAAGGCATATCGCTACCAACAGCATCGCTGGTCTTGTGGGCCAGCCAATCTTTTCAGGAAAATGATAATGGAGATTATTAAAAACAAGAAAGTGTCTTTCTGGAAGAAGATTCATGTGGTATACAGCTTCTTCTTTGTTCGAAAAGTCATAGCCCACATCAACACATTTGTATTTTATTGCATTGTATTACCTGCAACTGTTTTGGTGCCTGAGGTCGTGGTCCCCAAGTGGGGAGCCGTATATATCCCTTCCGTCATCACCCTTCTTAACGCAGTTGGAACTCCAAGGTCACTGCACTTGCTGGTTTTCTGGATTCTGTTTGAGAATGTCATGTCTCTGCATAGAACAAAGGCTACAATAATTGGCTTGCTAGAGGCAAGTCGAGTGAATGAATGGATTGTCACTGAAAAGCTTGGAGACGCACTTAAAGCTAAAGCAGACACGAAAACATCCAAGAAGCCTCGATTCAGGATTGGAGACAGGATTCACTTGTTAGAGCTTGGTGTTGGATTTTACCTCTTCTTCTGTGGGTGCTACGATGTGCTGTTTGGGAAAAACCACTACTTCATATTCCTTTATATGCAAGCAGTTGCTTTCTTCGTCATGGCTTTTGGATACGTTGGCACCTTTGTTCCCAACTCCTAG 1602 0.4469 MDPLSSTTMLPDAFQGARDDISLQLGLIWSQIKAPLVVPLLRIAVVLCLIMSLLMFIERVYMCIVITLVKLFGRKPEKRYKWEPMKDDVELGNSAYPMVLVQIPMYNEREVYHLSIGAACGLSWPSDRIIIQVLDDSTDPTIKGLVEVECQRWASKGINIKYEIRDNRNGYKAGALKEGMKRSYVKQCDFVAIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLANLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMIMEIIKNKKVSFWKKIHVVYSFFFVRKVIAHINTFVFYCIVLPATVLVPEVVVPKWGAVYIPSVITLLNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEASRVNEWIVTEKLGDALKAKADTKTSKKPRFRIGDRIHLLELGVGFYLFFCGCYDVLFGKNHYFIFLYMQAVAFFVMAFGYVGTFVPNS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3114 533 Pfam Glycosyl transferase family group 2 191 388 IPR001173 -
Sto13g3114 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 312 IPR029044 -
Sto13g3114 533 PANTHER - 1 532 - -
Sto13g3114 533 PANTHER BNAC09G36340D PROTEIN 1 532 - -
Sto13g3114 533 CDD CESA_CaSu_A2 97 333 - -
Sto13g3114 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 375 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3114 Sto-Chr13 35526160 35529843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3114 1 532 Miscellaneous Gene Families AT5G03760 80.675 0.0 934
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3114 K13680 - gmx:100782772 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2513 8 17415982 17421888 Sto13g3114 13 35526160 35529843 CCT
Sto13g3114 13 35526160 35529843 Sto13g3114 13 35526160 35529843 ECH