Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2198 ATGAATTTTGATGACTTTGGTTCTCATAGAGATGATAATAAAACCATGCTTAAGCTGTTTCTTAATAGCTCAAATGTTGGGATGATGTGGTTCATGGAATGCATACATTCTAAAATGCCAGATTTTAAGAAAGGATGCTACACTATAAAGTCACATGGAGGCAAGTTGGTTAGAACACATAAACTTGATTGGCTGGTACTTCTGCTTCTTCTGGTTATAGACTTATTCATGGATTCGTTAGAACCTTTTCACCGCTTTGTGGGGGAAGGCATGATGACAGATCTGAAATACCCATATAAAGATGAAACTATACCCTTTCGGGTGGTTCAAATAGTAGCCATATTGTTTCCCATTGCTATCTTTTTTATCTTCTACATTTGCAGGAGGAATGTTTATGATTTGCATCATTCAATATTGGGTGTTCTTTTCTCGGTACTTATAAATGCAGTTATCACGGATTCAATTAAAGTTGCTGTTGGTCGACCACGACCAAGTTTCTTCTGGCGGTGTTTCCCTGATGGTAAAGCGGTATTTGATGCCATCACAAATGATGTAGTTTGTCATGGGGATGAGAAGATTATAAAGGAAGGATACAAAAGTTTTCCAAGTGGGCACACTTCATGGGCCTTTGCAGGTTTGGCTTTTCTTGCATGGTATTTATCAGGAAAAATTAGAGTGTTTGATCGCAGGGGTCATATTGCCAAACTCTGTCTTGTACTGCTTCCTTTACTTCTTGCTGCTTTTGTGGGAGTTTCCCGGGTTGATGACTACAGGCATCATTGGCAGGATGTGTTTGCTGGAGGGCTATTAGGGATTACTGTAGCTTCAACTTGCTACTTGCTACTCTTTCCTTTTCCTCATCAAACAGATTTGAAGCTTACCATTCTCCTTGCTTTTCCTAAGGATATGCTTCCTTCCATGTTGTTGTCCTCCTATTCCTTTAATGCTCTTTAG 954 0.3941 MNFDDFGSHRDDNKTMLKLFLNSSNVGMMWFMECIHSKMPDFKKGCYTIKSHGGKLVRTHKLDWLVLLLLLVIDLFMDSLEPFHRFVGEGMMTDLKYPYKDETIPFRVVQIVAILFPIAIFFIFYICRRNVYDLHHSILGVLFSVLINAVITDSIKVAVGRPRPSFFWRCFPDGKAVFDAITNDVVCHGDEKIIKEGYKSFPSGHTSWAFAGLAFLAWYLSGKIRVFDRRGHIAKLCLVLLPLLLAAFVGVSRVDDYRHHWQDVFAGGLLGITVASTCYLLLFPFPHQTDLKLTILLAFPKDMLPSMLLSSYSFNAL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2198 317 PANTHER LIPID PHOSPHATE PHOSPHATASE 39 290 IPR043216 GO:0006644
Sto8g2198 317 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 59 287 IPR036938 -
Sto8g2198 317 Pfam PAP2 superfamily 139 282 IPR000326 -
Sto8g2198 317 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 57 292 - -
Sto8g2198 317 SMART acid_phosph_2 138 279 IPR000326 -
Sto8g2198 317 PANTHER LIPID PHOSPHATE PHOSPHATASE 2 39 290 - -
Sto8g2198 317 CDD PAP2_containing_1_like 93 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2198 Sto-Chr8 14527627 14530697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2198 39 290 Lipid Metabolism Gene Families AT3G02600 59.127 1.27e-114 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2198 K18693 - nnu:104613308 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2198 8 14527627 14530697 Sto8g2198 8 14527627 14530697 ECH
Sto10g0583 10 4923376 4927086 Sto8g2198 8 14527627 14530697 ECH
Sto11g0659 11 7652089 7655452 Sto8g2198 8 14527627 14530697 ECH
Sto8g2198 8 14527627 14530697 Sto10g0583 10 4923376 4927086 ECH