Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0583 TTGTCAAGCAGGAGGCTGGGAATCTCTTCTATGATGGGTGGTAACTTTTCTTCGACTAATATTCCATTGCTTGACAAAGAGAATGAAGAGCAATTCAGAATGAGGGAAATCCAGCTTGGTTCGCATACTGTGAGGTCACATGGGTATACAGTTGCAAAAACACACCGACATGATTGGCTCATACTTTTGCTCCTTGTGTTGATTGAGATTATCTTATACATTATCCATCCTTTCTATCGCTTTGTTGGGAAGGATATGATGACTGACCTCAGATATCCCTTGAAAAGTAATACTGTCCCCGTTTGGGCCGTTCCTATGTATGCTATTTTATTGCCTATGGTGATATTTCTTGTAGTCTACATCCGAAGGAGAGATGTCTATGATCTTCATCATGCCATATTAGGTCTCTTGTTCTCTGTTTTAGTAACAGCAGTAATTACTGATTCCATAAAAAATGCTGTAGGTCGACCTCGACCAGACTTCTTCTGGCGATGTTTTCCAGATGGAAAAGATGTTTATGACAAATGGGGAAATGTCATATGTCATGGTGACAAGAATGTCATAAAGGAAGGACACAAGAGTTTCCCAAGTGGCCATACTTCATGGTCCTTTGCTGGTCTGGGTTTCCTATCATTGTACTTATCCGGTAAAATAAAAGCATTTGATAGCACAGGTCATGTTGCAAAACTTTGCCTTGTGTTTCTCCCTCTGCTTTTTGCATCGCTTGTTGGCATTTCTCGAGTTGATGACTATTGGCACCATTGGCAGGATGTGTTCGCAGGAGGTCTCTTAGGGCTTATAGTGGCTACATTTTGCTATTTACAATTTTTTCCTCCTCCATATCACCACGAAGGCTGGGGACCGTATGCTTACTTCAGGATGTTGGAGGAAACAAGTGCTACTACACACTCAAATAATGCTCAACATTCTTGCCATGCACAGCCTTCAGATGCTCAGGGGTGTATAGGCTTATCTGTTGCAAGGGATGAGCATAGTTCAACAATGGATGAAATGGAATCTGGGAGAAGATAA 1032 0.4167 LSSRRLGISSMMGGNFSSTNIPLLDKENEEQFRMREIQLGSHTVRSHGYTVAKTHRHDWLILLLLVLIEIILYIIHPFYRFVGKDMMTDLRYPLKSNTVPVWAVPMYAILLPMVIFLVVYIRRRDVYDLHHAILGLLFSVLVTAVITDSIKNAVGRPRPDFFWRCFPDGKDVYDKWGNVICHGDKNVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDSTGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLIVATFCYLQFFPPPYHHEGWGPYAYFRMLEETSATTHSNNAQHSCHAQPSDAQGCIGLSVARDEHSSTMDEMESGRR 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0583 343 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 54 283 IPR036938 -
Sto10g0583 343 Pfam PAP2 superfamily 133 277 IPR000326 -
Sto10g0583 343 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 53 285 - -
Sto10g0583 343 SMART acid_phosph_2 133 273 IPR000326 -
Sto10g0583 343 CDD PAP2_containing_1_like 88 276 - -
Sto10g0583 343 PANTHER LIPID PHOSPHATE PHOSPHATASE 1 27 315 - -
Sto10g0583 343 PANTHER LIPID PHOSPHATE PHOSPHATASE 27 315 IPR043216 GO:0006644
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0583 Sto-Chr10 4923376 4927086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0583 34 342 Lipid Metabolism Gene Families AT3G02600 71.565 4.52e-173 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0583 K18693 - gmx:100819064 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0583 10 4923376 4927086 Sto8g2198 8 14527627 14530697 ECH
Sto10g0583 10 4923376 4927086 Sto10g0583 10 4923376 4927086 ECH
Sto8g2198 8 14527627 14530697 Sto10g0583 10 4923376 4927086 ECH
Sto11g0659 11 7652089 7655452 Sto10g0583 10 4923376 4927086 ECH