Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1915 ATGTCGCAGCCTCGAGTCTTCATCACCTTGGGACGCACTGGTCAGGTGGTAGAGAGAGTTGGAACAGAATCAAACTCTAGAGAACTGCGCCATGATATTGGGCCACGGTCTGGAAGCAAACGATCTATAGGGGATGCATTGAGGACTAATCCTGATGGTTCCTTAGTCTCAAGGAAGCGGCAGCGAGAAGATTGTACTTATAGTGGTGCTTGTGAGAATGGAGTAAATGAAATGGGGCTGACAGCAGACGACCTCAGATTGAAGCTAATGCACAGAAGGTCCAAACAAAATGGTTTAGACAAGCTCAGGAAGGCAGACCACCTGCATGGAGAGCTGGTCAAATCGGCTCAACCATCAGCAAGTAACAGCATATTTCAGCTAATGCCTCAGGCAAAAGAAAGTTTCCATCTAAGGAAAATGTCCTACACACAAAATGCTGGTCAAATTAATCAGGTGGGTTCGATGCAGAAACTCAACTCCTCTTGCATTGCACATGATGTAGGAGTTAGACCTCCAGATACCCTATTAAGAACGACCAGGGGTATATTACCACCAACAAATTATGATGGCCTGCAACAATTTCCATCTATAAGGGCAACTGATGTTTCAACAACTAAAGTTTTTATGAGGAATGGTATTTATGATGCGTCAAGGTCAACTGGGTTCGCACCTACCACATTCAAAAGCACTACTGAAAATGCCAAACCAGTTACACAACTTGCGGCAATGAATGGCATCTCACAAGTGGGGTGGATACCTCTTACTGTCTCTGGTCTCTTGCATTCACTTGgattagaaaaatatgagattgcCTTTCGTGCTGAAGAAGTAGATATGACAGCATTGAAGCAAATGGGAGATAAGGACCTTAAAGACTTGGGAATCCCAATGGGACCAAGGAAGAAGATTCTCGCTCACATGCTCCGTTCAAAACAGCAACCTCCACAAGTTCGAAATTTGAATTTGGCTCTTGATAGATAG 981 0.4353 MSQPRVFITLGRTGQVVERVGTESNSRELRHDIGPRSGSKRSIGDALRTNPDGSLVSRKRQREDCTYSGACENGVNEMGLTADDLRLKLMHRRSKQNGLDKLRKADHLHGELVKSAQPSASNSIFQLMPQAKESFHLRKMSYTQNAGQINQVGSMQKLNSSCIAHDVGVRPPDTLLRTTRGILPPTNYDGLQQFPSIRATDVSTTKVFMRNGIYDASRSTGFAPTTFKSTTENAKPVTQLAAMNGISQVGWIPLTVSGLLHSLGLEKYEIAFRAEEVDMTALKQMGDKDLKDLGIPMGPRKKILAHMLRSKQQPPQVRNLNLALDR 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1915 326 Gene3D - 255 322 IPR013761 -
Sto8g1915 326 SUPERFAMILY SAM/Pointed domain 249 315 IPR013761 -
Sto8g1915 326 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 316 - -
Sto8g1915 326 MobiDBLite consensus disorder prediction 23 38 - -
Sto8g1915 326 ProSiteProfiles SAM domain profile. 251 295 IPR001660 GO:0005515
Sto8g1915 326 PANTHER - 1 316 - -
Sto8g1915 326 MobiDBLite consensus disorder prediction 20 61 - -
Sto8g1915 326 Pfam SAM domain (Sterile alpha motif) 250 306 IPR001660 GO:0005515
Sto8g1915 326 SMART SAM_4 248 313 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1915 Sto-Chr8 12289172 12292214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1915 255 304 Glycosyltransferase AT3G07170 66.000 1.73e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1915 - - vvi:100250700 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1915 8 12289172 12292214 Sto8g1915 8 12289172 12292214 ECH
Sto11g1069 11 10849083 10853589 Sto8g1915 8 12289172 12292214 ECH