Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1069 ATGTCTGATAGTTCGAGGGGCCGAGTTACAATTACTCTTGGGCGTAGGGGTcagGTCGTGAAGAGGGACCAATCTGCAGCGGATGTTTCTTTTCCTGCTTTTCCCCCAGCTGGGACTAAGCGGTCCGTAAGAGATAGGATTGGAAATGATGCAGACAGTTCCATGTGGCATGGTAACCAACCCAACAATAATAAAAGACAGCGAGGAGATATGAGCTTGCGAAATGGGGTCAATGGTAATGGGCGAATTGGCAAAGATGACCTTCGGTTGAAGCTTATGCGAAaaagtgcatctagacgggctGACAGTGGTAAGAGGCATGTAGACCTTCGTGAAAAATTGTCAAAGTCAGTTCAACCTTCAGTGGCCAGTATTAATTCAAAGCAGCGCTTGCCTGAATCAAGGGAAACAAGCATGTTGGGGCGAATCCCCTCTAATAGAAGTTCTAGTGATTTATCACGTATTGAATCAATGAGAAGTTCATACTCTCCTTGGACATTGGATCATATAAGACGAAGATCACCTGAAGGGTTCCCAAGTACTTCCAGGGGCATTTCCCCCCAAACAAACAGGGAAGACCTGCAGAGAAGGCCTTCGGACAGGACATATGATGGTATCAGGTCTGCTCCATATGTAAATAGGGATGTTCTTGACACTTCAAGGCCTTCAAGCACTGCGCCTTCATCTTTTGTGGCACACCCCACAATGTCCACATTGCCTCCCGTAACTGCTAAGCCTGTGACACCTCATCCTGGGCAACTGCCCCCACCAAGCAGTGTTGCACCAAGGACTCCATATGTGTCCAACGAACAGCAAACACAAACTGTTGATGGCTTGTTACATGCATTGGGACTGGGAAAATATGCCATTCTCTTCAAGGCTGAGGAAGTGGATATGACTGCATTGAAGCAGATGGGAGAAAATGACCTCAAAGAGCTTGGGATTCCCATGGGtccaagaaaaaaaatcctTCTTGCTCTCTTGCCTCGTGCCAAACGTCATCCTTGA 1008 0.4554 MSDSSRGRVTITLGRRGQVVKRDQSAADVSFPAFPPAGTKRSVRDRIGNDADSSMWHGNQPNNNKRQRGDMSLRNGVNGNGRIGKDDLRLKLMRKSASRRADSGKRHVDLREKLSKSVQPSVASINSKQRLPESRETSMLGRIPSNRSSSDLSRIESMRSSYSPWTLDHIRRRSPEGFPSTSRGISPQTNREDLQRRPSDRTYDGIRSAPYVNRDVLDTSRPSSTAPSSFVAHPTMSTLPPVTAKPVTPHPGQLPPPSSVAPRTPYVSNEQQTQTVDGLLHALGLGKYAILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLALLPRAKRHP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1069 335 ProSitePatterns Protein kinases ATP-binding region signature. 283 303 IPR017441 GO:0005524
Sto11g1069 335 MobiDBLite consensus disorder prediction 22 155 - -
Sto11g1069 335 SUPERFAMILY SAM/Pointed domain 273 327 IPR013761 -
Sto11g1069 335 Gene3D - 272 334 IPR013761 -
Sto11g1069 335 MobiDBLite consensus disorder prediction 171 237 - -
Sto11g1069 335 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 332 - -
Sto11g1069 335 MobiDBLite consensus disorder prediction 117 155 - -
Sto11g1069 335 MobiDBLite consensus disorder prediction 53 74 - -
Sto11g1069 335 ProSiteProfiles SAM domain profile. 271 334 IPR001660 GO:0005515
Sto11g1069 335 PANTHER OSJNBA0060P14.15 PROTEIN 1 332 - -
Sto11g1069 335 Pfam SAM domain (Sterile alpha motif) 273 327 IPR001660 GO:0005515
Sto11g1069 335 MobiDBLite consensus disorder prediction 217 236 - -
Sto11g1069 335 MobiDBLite consensus disorder prediction 84 114 - -
Sto11g1069 335 SMART SAM_4 268 333 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1069 Sto-Chr11 10849083 10853589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1069 269 327 Glycosyltransferase AT3G07170 57.627 5.41e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1069 - - lang:109333210 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1069 11 10849083 10853589 Sto11g1069 11 10849083 10853589 ECH
Sto11g1069 11 10849083 10853589 Sto8g1915 8 12289172 12292214 ECH