Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1862 atgGGGAAGGACGCGTACGAGCAAGCCATTGAAGAACTGAAGAAACTCTTAATaGAGAAGGGTGAATTGAAAGCCTCAGCAACAGAAAAAATAGAACAGATAACGGCTGAGTTGGGAACACAGGCACCTGGAAGCGTGGCTACCTCTGCAGCTGTGGAGAGGATCAAAGCTGGCTTTATTCACTTCAAGAAAGAGAAATATGATATGAGCCCTGCTTTGTACGGTGAACTAGCCAAAGGACAGAGCCCCAAGTACATGGTGTTTGCTTGCTCAGACTCAAGGGTGTGTCCATCTCATATACTGAATTTCCAACCAGGAGAGGCTTTTGTCGTAAGAAATGTGGCTAACATGGTCCCACCATATTGCCAGACAAGATACGCTGGAGCTGGTGCTGCCATTGAGTACGCTGTTCTGCATCTCAAGGTGCAGAACATTTTGGTGATTGGTCACAGTGCTTGTGGTGGTATCAAGGGGCTTATGTCTATCCCAGATAATGGAGCTGTTAACTCAACTGACTTTATTGAGGACTGGGTGAAGATTGGTTTGCCTGCAAAGGCAAGAGTGAAGGCTGTACATGGTGATGCACCTTTTGGAGAGCTCTGCACACAGTGTGAGAAGGAAGCAGTGAATCTATCACTGGGGAATCTGCTGACATACCCATTTGTGAGAGATGGGTTGGTGAACAAGACATTGGCACTGCAAGGAGGATACTATGACTTTGTGAAAGGATCATTCGAGCTGTGGGGGCTTCAGTTCGGTCTTTCTTCATCATTCTCCGTAAAAGATGTGGCCACCATTCTGCATTGGAAGCTATAG 816 0.4657 MGKDAYEQAIEELKKLLIEKGELKASATEKIEQITAELGTQAPGSVATSAAVERIKAGFIHFKKEKYDMSPALYGELAKGQSPKYMVFACSDSRVCPSHILNFQPGEAFVVRNVANMVPPYCQTRYAGAGAAIEYAVLHLKVQNILVIGHSACGGIKGLMSIPDNGAVNSTDFIEDWVKIGLPAKARVKAVHGDAPFGELCTQCEKEAVNLSLGNLLTYPFVRDGLVNKTLALQGGYYDFVKGSFELWGLQFGLSSSFSVKDVATILHWKL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1862 271 PANTHER CARBONIC ANHYDRASE 1 260 IPR001765 GO:0004089|GO:0008270
Sto8g1862 271 CDD beta_CA_cladeB 58 248 IPR045066 GO:0004089|GO:0008270
Sto8g1862 271 Pfam Carbonic anhydrase 85 244 IPR001765 GO:0004089|GO:0008270
Sto8g1862 271 SMART Pro_CA_2 78 249 IPR001765 GO:0004089|GO:0008270
Sto8g1862 271 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 134 154 IPR015892 GO:0004089|GO:0008270|GO:0015976
Sto8g1862 271 PANTHER BETA CARBONIC ANHYDRASE 2, CHLOROPLASTIC 1 260 - -
Sto8g1862 271 Coils Coil 6 26 - -
Sto8g1862 271 SUPERFAMILY beta-carbonic anhydrase, cab 45 254 IPR036874 GO:0004089|GO:0008270
Sto8g1862 271 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 90 97 IPR015892 GO:0004089|GO:0008270|GO:0015976
Sto8g1862 271 Gene3D Carbonic anhydrase 41 260 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1862 Sto-Chr8 11897967 11899784 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1862 K01673 - jre:108992857 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1862 8 11897967 11899784 Sto8g1862 8 11897967 11899784 ECH
Sto11g1118 11 11219033 11224543 Sto8g1862 8 11897967 11899784 ECH
Sto6g4329 6 45977528 45979838 Sto8g1862 8 11897967 11899784 ECH