Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1118 ATGGCTGGGGCATTAAAGAAGTGCATGATGCTGTGTTGTGTGAGCAAGATTGTGTCGAAGGAAGACATGGCTGGAGAGTCATTCGAGGAAGCCATTGCTGGCCTCACCAAGCTTCTCAGTGAGAAAGCTGACCTCGGAGGCGTCGCCGCCGCAAAGATCAAGCAGCTAACCGACGAGTTGAAGTCGAACCCGGACGAGAGGATCCGAACCGGGTTCACTCACTTCAAGAAAGAGAAATTCGAGAAGAATCCAGAATTGTATGGCGAACTTGCCAAAGGCCAGAGCCCAAAGTTTTTGGTATTTGCATGCTCGGACTCGAGAGTTTGCCCATCCCATGTGCTCAATTTCCAACCAGGAGAGGCTTTTGTGGTCCGAAATATTGCCAACATGATTCCTCCTTATGACAAGaCAAAATATTCAGGAACAGGGGCAGCCATTGAATATGCAGTCTTGCATTTAAAGgTAGAAAATATAATAGTCATTGGACATAGCTGCTGTGGAGGTATAAAGGGGCTAATGTCCATTCCTGATGATGGGACCACTGCAAGTGAATTTATAGAGCACTGGGTTCAAATTTGTAATCCAGCGAAGTCCAAGGTGAAGGCAGAAACAGAGAGCTTGAGTTTTTCAGAGAAGTGCACAAACTTGGAGAAGGAAGCTGTGAATGTATCACTTGGGAACCTACTGACATACCCATTTGTGAGAGATGGGGTTGTGAACAAAACACTTGCATTAAAAGGTGCACATTACGATTTTGTTAATGGCACTTTTGAGCTCTGGGATCTTGACTTCAAAATTTCACCATTTTTATCTGTTTGA 819 0.4493 MAGALKKCMMLCCVSKIVSKEDMAGESFEEAIAGLTKLLSEKADLGGVAAAKIKQLTDELKSNPDERIRTGFTHFKKEKFEKNPELYGELAKGQSPKFLVFACSDSRVCPSHVLNFQPGEAFVVRNIANMIPPYDKTKYSGTGAAIEYAVLHLKVENIIVIGHSCCGGIKGLMSIPDDGTTASEFIEHWVQICNPAKSKVKAETESLSFSEKCTNLEKEAVNVSLGNLLTYPFVRDGVVNKTLALKGAHYDFVNGTFELWDLDFKISPFLSV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1118 272 CDD beta_CA_cladeB 71 260 IPR045066 GO:0004089|GO:0008270
Sto11g1118 272 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 103 110 IPR015892 GO:0004089|GO:0008270|GO:0015976
Sto11g1118 272 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 147 167 IPR015892 GO:0004089|GO:0008270|GO:0015976
Sto11g1118 272 SMART Pro_CA_2 91 261 IPR001765 GO:0004089|GO:0008270
Sto11g1118 272 PANTHER CARBONIC ANHYDRASE 23 272 - -
Sto11g1118 272 SUPERFAMILY beta-carbonic anhydrase, cab 66 269 IPR036874 GO:0004089|GO:0008270
Sto11g1118 272 Pfam Carbonic anhydrase 99 256 IPR001765 GO:0004089|GO:0008270
Sto11g1118 272 PANTHER CARBONIC ANHYDRASE 23 272 IPR001765 GO:0004089|GO:0008270
Sto11g1118 272 Gene3D Carbonic anhydrase 58 272 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1118 Sto-Chr11 11219033 11224543 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1118 K01673 - gmx:100810496 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4329 6 45977528 45979838 Sto11g1118 11 11219033 11224543 CCT
Sto11g1118 11 11219033 11224543 Sto11g1118 11 11219033 11224543 ECH
Sto11g1118 11 11219033 11224543 Sto8g1862 8 11897967 11899784 ECH