Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1716 ATGGCTGCCTCATTCTCCGTCTGcaactttctctcttttctcttacCAACCACTCCTCCGCCACCCCCTCAACAATTcaatctcccttcttcttcttcatcatcgaCTCGGTTTCCGTCTCAGTCCCAGAAATTTGcttcgtcttcctTATCCTCCGTCATATGCCCATCTCTCGCTTATGCGAACACGCTCTTCTTCAAATCGGCGTACAATGTGCAGGTGGTGGTTGATGACAACGAGCCCGAGGAGAGGCTGCTCAACAGGTTCCGAAGGGAGGTGATGAAGACCGGTGTCATTCAAGAATGTAAAAGAAGGAGGTTCTTTGAGAACAAGCAGGATGAGAGGAAGCGCAAGTCCCGCGAGGCTGCCAAGCGTAATCGCATTTTCAGGCGCCCCCTGCCACGAAATCCATTAGAGAACAAGCAGGACGTCccaacaacaaaaaaagaagaggatGATGACAACTGGGATTTACCTGAAGAAAACATTCCATATTGA 498 0.4217 MAASFSVCNFLSFLLPTTPPPPPQQFNLPSSSSSSTRFPSQSQKFASSSLSSVICPSLAYANTLFFKSAYNVQVVVDDNEPEERLLNRFRREVMKTGVIQECKRRRFFENKQDERKRKSREAAKRNRIFRRPLPRNPLENKQDVPTTKKEEDDDNWDLPEENIPY 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1716 165 TIGRFAM S21p: ribosomal protein bS21 72 127 IPR001911 GO:0003735|GO:0005840|GO:0006412
Sto8g1716 165 PANTHER PROTEIN S21 FAMILY PROTEIN, PUTATIVE-RELATED 33 165 - -
Sto8g1716 165 Pfam Ribosomal protein S21 73 127 IPR001911 GO:0003735|GO:0005840|GO:0006412
Sto8g1716 165 Gene3D Ribosomal protein S8 86 124 IPR038380 -
Sto8g1716 165 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 33 165 IPR001911 GO:0003735|GO:0005840|GO:0006412
Sto8g1716 165 MobiDBLite consensus disorder prediction 111 165 - -
Sto8g1716 165 PRINTS Ribosomal protein S21 family signature 75 83 IPR001911 GO:0003735|GO:0005840|GO:0006412
Sto8g1716 165 PRINTS Ribosomal protein S21 family signature 83 92 IPR001911 GO:0003735|GO:0005840|GO:0006412
Sto8g1716 165 PRINTS Ribosomal protein S21 family signature 95 105 IPR001911 GO:0003735|GO:0005840|GO:0006412
Sto8g1716 165 PRINTS Ribosomal protein S21 family signature 107 117 IPR001911 GO:0003735|GO:0005840|GO:0006412
Sto8g1716 165 MobiDBLite consensus disorder prediction 111 153 - -
Sto8g1716 165 Hamap 30S ribosomal protein S21 [rpsU]. 71 127 IPR001911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1716 Sto-Chr8 10952237 10953231 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1716 - - bhj:120087249 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1716 8 10952237 10953231 Sto13g0466 13 4138990 4140487 CCT
Sto8g1716 8 10952237 10953231 Sto8g1716 8 10952237 10953231 ECH