Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1582 ATGGGTGCAAGTCGAAAGCTACAAGGTGAGATAGATCGTGTACTGAAGAAGGTCCAAGAAGGCGTTGAAGTCTTCGATAGTATCTGGAACAAGGTTTACGATACTGACAATGCCAACCAAAAGGAGAAATTTGAGGCGGACCTGAAAAAGGAGATTAAGAAGCTCCAGAGGTACAGAGACCAAATCAAAACTTGGATTCAGTCCAGCGAGATCAAGGATAAGAAGGTTAGTGCCTCTTATGAGCAGGCTCTCGTGGATGCACGAAGGCTCATTGAGCGTGAAATGGAAAGATTTAAGATCTGCGAAAAGGAAACTAAgaccaaagcattctccaaagAAGGCTTGGGCCAACAGCCCAAAACTGATCCCAAGGAGAAGGCTAAATCAGAGACAAGGGATTGGTTGAACAATGTGGTTGGAGAGTTAGAATCTCAGATTGATAACTTTGAAGCTGAGCTTGAAGGGCTTTCtgtcaaaaaaggaaaaagcagGCCACCTCGATTGATGCATCTAGAGACGTCAATTACCCGTCACAAGGCTCATATAAAGAAATGTGAATTACTCTTGAGACTACTTGATAACGAAGAATTAAGCCCTGAGCAGGTCAATGATGTCAAAGATTTCTTGGAAGACTATGTGGAGCGTAATCAGGAGGACTTTGATGAATTCAGTGATGTCGATGAGCTATACAGTTCAGTACCTTTAGACAAGGTGGAATCTCTAGAAGATCTTGTCACAATTGGTCCCCCGGGTCTTGCTAAGGTATTTGTTTACACATTATTGCTTTGCGGTTTGAAGACTTCTTTGGCGGCATCAGCCTCAGCTTCACAAACATCTGGTGCCTCTGTCCAGGAGCAAGCTGATGATACAGCCTCCCAGGATAGTAATTCTGATACCATAGCTAGAACCCCACCTTCTAAAAGTAGTGGAATCAGTTCTAATACTTCAATACCAACTGGGAACCATGCTACTCCTGTTTCTCATCATTTGTCCGGTCCACCTGCTTCTGCAACAGTCATCCCTGTTACAAGCCCTGCTCGAAGTGCTTTGGAGAATACTGCTGCTGCTAATTCTTCGTCTTCTGTAAATCAGTCTACTTCTataaaagaagaagatggtAATAGCTTCCCTGGCCGCAGAGCATCTCCATCACTTTCTGATGCTGCACACGTGAGAGGCATAAGTAGAAACAGCATGTCTAATCAAGTAACATCTGGTATTCCTCTTGGTTCTGGCAACATTGTTTCCGGTAATGGGGCCCTTGGTTCAGTCCCTTCAGCCTCTGAAATAACTAAGAGAAACATATTGGGAACTGATGATCGGCTTGGAAGTAGTGGGATGGTGCAGCCTTTACTATCTCCCCTCAGTAATAAAATGATATTACCTCAGTCTGTGAAGGTCAGTGATGGAACTGGTTCAGTTGACTCTAGTAATGTTAATGAAGCTGCAGCTGTATCTGGTAGAGTTTTTTCCCCATCTGGAGTTCCTGGCATGCAATGGAGACCTGGAAGTCCTTTTCAGAACCAGACTGAGAcgGGGCAGCTTCGTGGGAGAACTGAAATAGCTCCTGATCAGAGGGAGAAATTTCTGCAGAAGTTTCAGCAAGTGCAGCAACAAGGGCACAGTACCCTTCTTGGTATGCCTTCTCTTACTGGAGGAAATCATAAGCAGTTTTCTGCTCAACAGCAAAACCCTCTCTTGCAACAGGTACCTTTCTTGTACAGTTATGGTTTGGGACTTGGGGTCCAGGCACCAGGCCTCAATAGTATTTCGTCTACCTCATTGCAGCAGCCATCCAATTCTATCCTCTCTCCATCTAGCCAACAGCCATTGATGTCAGGTGTTTCTAAGGATGCTGATGTTGGCAATTCTAAAGTTGAGGAACATCAGCAACAGCAGAATTTTCCTGATGATTCAGTGACTGAATCTGCTGCCGGTACTGGGCTTGGCAAGAATCTCCTAGATGAAGATGATTTGAAATCTGCATATGCTGTAGATTCTCCGGCAGGAGTTTCTGGCTCTCTTTCAGAGCCTGCTCAGAGCTCCAGAGATACTGATTTCTCTCCTGGCCAACCTTTACAATCCAATCAATCTTCTGGTAACCTTGGTGTCATCGGAAGAAGAAGTGTTGCTGACCTTGGAGCCATTGGTGATAATTTTGGTGGAACAAGTGTTAATTCTGGTGTAGTGCGtgatcaattatttaatttgcagATGCTTGAGGCAGCCCACTACAAACTTCCACAACCTAAAGACTCAGAACGTCCCAGGACTTATACTCCTAAGCACCCGACAATAACACCTCCTAGTTATCCTCAAGTACAGGCCCCCATTGTCAGCAATCCTGCCTTTTGGGAGAGAGTAGGTGTCGAACCATTTGGCACTGATACCCTGTTCTTTGCATTTTATTACCAACAGAACACTTATCAACAATATTTGGCggcaaaagaactcaagaagcagtCTTGGAGATATCACAGAAAGTATAACACATGGTTTCAGCGACATGAAGAGCCTAAAGTagcaactgatgaatatgagcAGGGAACATATGTATACTTCGATTTTCATATTGCAAATGATGATCTGCAACATGGGTGGTGTCAAAGAATCAAGACAGAGTTCACTTTTGAGTATAATTATCTTGAAGATGAGCTTATTGTATAG 2667 0.4214 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARRLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKSRPPRLMHLETSITRHKAHIKKCELLLRLLDNEELSPEQVNDVKDFLEDYVERNQEDFDEFSDVDELYSSVPLDKVESLEDLVTIGPPGLAKVFVYTLLLCGLKTSLAASASASQTSGASVQEQADDTASQDSNSDTIARTPPSKSSGISSNTSIPTGNHATPVSHHLSGPPASATVIPVTSPARSALENTAAANSSSSVNQSTSIKEEDGNSFPGRRASPSLSDAAHVRGISRNSMSNQVTSGIPLGSGNIVSGNGALGSVPSASEITKRNILGTDDRLGSSGMVQPLLSPLSNKMILPQSVKVSDGTGSVDSSNVNEAAAVSGRVFSPSGVPGMQWRPGSPFQNQTETGQLRGRTEIAPDQREKFLQKFQQVQQQGHSTLLGMPSLTGGNHKQFSAQQQNPLLQQVPFLYSYGLGLGVQAPGLNSISSTSLQQPSNSILSPSSQQPLMSGVSKDADVGNSKVEEHQQQQNFPDDSVTESAAGTGLGKNLLDEDDLKSAYAVDSPAGVSGSLSEPAQSSRDTDFSPGQPLQSNQSSGNLGVIGRRSVADLGAIGDNFGGTSVNSGVVRDQLFNLQMLEAAHYKLPQPKDSERPRTYTPKHPTITPPSYPQVQAPIVSNPAFWERVGVEPFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELIV 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1582 888 PANTHER CCR4 NOT-RELATED 1 888 IPR040168 GO:0030015
Sto8g1582 888 Coils Coil 41 61 - -
Sto8g1582 888 MobiDBLite consensus disorder prediction 749 773 - -
Sto8g1582 888 Pfam NOT2 / NOT3 / NOT5 family 745 882 IPR007282 GO:0006355
Sto8g1582 888 PIRSF NOT_su_3_5 1 888 IPR012270 GO:0006355|GO:0030015
Sto8g1582 888 MobiDBLite consensus disorder prediction 276 326 - -
Sto8g1582 888 MobiDBLite consensus disorder prediction 591 614 - -
Sto8g1582 888 MobiDBLite consensus disorder prediction 337 372 - -
Sto8g1582 888 MobiDBLite consensus disorder prediction 626 641 - -
Sto8g1582 888 MobiDBLite consensus disorder prediction 276 387 - -
Sto8g1582 888 MobiDBLite consensus disorder prediction 591 653 - -
Sto8g1582 888 MobiDBLite consensus disorder prediction 666 703 - -
Sto8g1582 888 Gene3D - 725 883 IPR038635 -
Sto8g1582 888 MobiDBLite consensus disorder prediction 110 131 - -
Sto8g1582 888 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 235 IPR007207 GO:0005634|GO:0006355
Sto8g1582 888 MobiDBLite consensus disorder prediction 673 703 - -
Sto8g1582 888 PANTHER BNAA10G16600D PROTEIN 1 888 - -
Sto8g1582 888 Coils Coil 132 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1582 Sto-Chr8 10146834 10160150 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1582 K12580 - gmx:100785965 1377.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1582 8 10146834 10160150 Sto13g0272 13 2403421 2413726 CCT
Sto8g1582 8 10146834 10160150 Sto8g1582 8 10146834 10160150 ECH