Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1355 ATGGACATAAGTAATGATGCTAATGTCGACCCTTTTTCAATTGGGCCTTCAAGCATTGTTGGACGAACAATTGCTTTTAAGGTTCTTTTCTGCAAGTCTTCCTCACATTTGATGCATCGGATATTTCGTGTTTTGGTGGGTCTCTTTTATAGATCTAGGGCAGGTTTATCATGGTTGCATCCAAGAAACCCACAGGGGCTATTAGCAATGATGACAATAGTTGCTTTCTTGTTGAAACGATACACAAATGTGAAAGCAAGGGCTAAAATGGCGTATAAGAGGAAATTTTGGAGAAATATGATGAGATCTGCATTAACTTACGAGGAGTGGGCTCATGCAGCTATGATGCTTGATAGAGAGACACCAAAGATGAATGAATCAGATCTTTATGATGTAGAACTGGTAAGGAACAAGCTTCAAGAACTCCGCCACCGTCGTCAAGAGGGATCCCTTAGAGATATAACATTTTTTATGCGTGCTGATCTTGTCAGAAATCTAGGTAACATGTGTAACCCTGAGCTTCACAAAGGTAGGCTTCAGGTGCCCAAATTAATCAAGGAGTATATTGATGAGGTATCAACTCAATTGAGGATGGTATGTCATTCTGATTCAGAGGAGCTCTTATTGGAAGAGAAGCTTTCTTTCATGCATGAAACAAGACATGCCTTTGGGAGGACTGCTTTGCTGTTAAGTGGGGGTGCTTCTCTCGGAGCTTTCCATGTTGGTGTAGTTAAAACACTAGTACAACACAAACTCTTGCCTAGAATAATTGCTGGTTCAAGTGTAGGTTCCATTATGTGTTCTGTTGTTGCTACTAGGTCGTGGCCGGAGCTTCAAAGTTTCTTTGAGGATTCCTGGCATTCATTGCAATTTTTTGATCAAATGGGTGGGATTTTCACAGTTGTGAAGAGGGTTATGACATATGGTGCTGTTCATGAGATCAGACAGTTGCAAATAATGTTGAGGAATCTAACAAGCAACCTTACATTTCAAGAAGCTTATGACATGACAGGTCGGATTCTCGGGATAACTGTTTGCTCTCCTAGAAAGCATGAACCACCGAGGTGTCTTAACTACTTGACTTCGCCTCATGTTGTTATATGGAGTGCAGTCACTGCTTCTTGTGCTTTTCCTGGCCTTTTTGAGGCTCAGGAGCTGATGGCTAAGGATAGAAGTGGAGAGATTGTCCCTTACCATCCTCCTTTTAATTTGGGCCCTGAGGAAGGATCCACACCGGTCCGCCGTTGGAGAGATGGTAGCTTGGAGATTGATTTACCTATGATGCAGTTGAAAGAGTTGTTCAATGTCAATCATTTTATTGTCAGTCAGGCCAACCCTCACATTGCTCCATTATTGAGGTTCAAGGAATTTGTAAGAGCTTATGGAGGCAATTTTGCTGCCAAGCTTGCACATCTTACGGAGATGGAGGTGAAACATAGATGTAATCAAATAATGGAACTTGGTTTTCCATTAGGTGGACTTGCCAAGCTATTTGCTCAAGATTGGGAAGGTGATGTAACTGTTGTAATGCCTGCAACACTTGCTCAGTACTCAAAAATCATACAGAACCCTTCCTATGTGGAGCTTCAAAAGGCAGCAAACCAAGGTAGAAGGTGCACTTGGGAGAAGCTTTCAGCCATAAAAGCAAACTGTGCCATTGAGATTGCTCTTGATGAGTCTGTTGCCTTACTCAACCACATGAGAAGACTTAAAAGAACAGCTGAAAGAACTTCTGCtgctgtttcttcttcttctcctcatgGTCTGGCCAATACTATCAAGTTCAGTGCTTCAAGAAGAATCCCTTCATGGAACTGCATGGCAAGAGAGAATTCCACAGGCTCCCTTGAAGACTATTCAACCGATGCCGCTCCCTCATCGCATCAAGGTACTTCTAAAAACCGGAAAACTCCCCGTAGCATACATGATCATGGAAGTGACAGTGAATCTGAGAATGTTGATTTGAACTCTTGGACACATTCCGGTGGACCTTTGATGAGAACAACATCAGCAAATAAGTTCATAGACTTTGTCCAGAACTTAGATTTTAATGCTGAACCAAATAGAGGCTTGGCTAGCCCTCATGCGGTTCAGTATAATAATCATCAAAGTTCAAGGGTCACAACACCAGATAGCATAATGGTGAATGAAGGTGATCTTTTGCAGCCTGAAAGGTTACATAATGGGATTGTGTTTAATGTTGTCAAGAAAGAAGACTTGTCGTTGACTCAACAACCTAGGACTCATGACTTTGAGCACCATGATGACCCTGAGGTTGCTGAGTGTGATGTCCAAGCTGACTGTCCTGGAAGTGAGATGGATGCTGCTAGCTCTGCTTCTGATTGTGGAGATTATGATTCTACAGCAATCGGCTCCTTGACTGATCATTCTGCCACTGATGTTGGTAAGGATGATGAGATCATGTTAGAAACTTAG 2436 0.4191 MDISNDANVDPFSIGPSSIVGRTIAFKVLFCKSSSHLMHRIFRVLVGLFYRSRAGLSWLHPRNPQGLLAMMTIVAFLLKRYTNVKARAKMAYKRKFWRNMMRSALTYEEWAHAAMMLDRETPKMNESDLYDVELVRNKLQELRHRRQEGSLRDITFFMRADLVRNLGNMCNPELHKGRLQVPKLIKEYIDEVSTQLRMVCHSDSEELLLEEKLSFMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVQHKLLPRIIAGSSVGSIMCSVVATRSWPELQSFFEDSWHSLQFFDQMGGIFTVVKRVMTYGAVHEIRQLQIMLRNLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEEGSTPVRRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRFKEFVRAYGGNFAAKLAHLTEMEVKHRCNQIMELGFPLGGLAKLFAQDWEGDVTVVMPATLAQYSKIIQNPSYVELQKAANQGRRCTWEKLSAIKANCAIEIALDESVALLNHMRRLKRTAERTSAAVSSSSPHGLANTIKFSASRRIPSWNCMARENSTGSLEDYSTDAAPSSHQGTSKNRKTPRSIHDHGSDSESENVDLNSWTHSGGPLMRTTSANKFIDFVQNLDFNAEPNRGLASPHAVQYNNHQSSRVTTPDSIMVNEGDLLQPERLHNGIVFNVVKKEDLSLTQQPRTHDFEHHDDPEVAECDVQADCPGSEMDAASSASDCGDYDSTAIGSLTDHSATDVGKDDEIMLET 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1355 811 Gene3D Cytosolic phospholipase A2 catalytic domain 216 308 - -
Sto8g1355 811 MobiDBLite consensus disorder prediction 768 811 - -
Sto8g1355 811 MobiDBLite consensus disorder prediction 636 650 - -
Sto8g1355 811 MobiDBLite consensus disorder prediction 781 795 - -
Sto8g1355 811 Pfam Patatin-like phospholipase 228 419 IPR002641 GO:0006629
Sto8g1355 811 SUPERFAMILY FabD/lysophospholipase-like 224 570 IPR016035 -
Sto8g1355 811 MobiDBLite consensus disorder prediction 615 657 - -
Sto8g1355 811 CDD Pat_SDP1-like 158 565 - -
Sto8g1355 811 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 228 431 IPR002641 GO:0006629
Sto8g1355 811 Pfam Domain of unknown function (DUF3336) 90 221 IPR021771 GO:0004806|GO:0006629
Sto8g1355 811 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 2 706 - -
Sto8g1355 811 MobiDBLite consensus disorder prediction 615 634 - -
Sto8g1355 811 Gene3D Cytosolic phospholipase A2 catalytic domain 310 489 - -
Sto8g1355 811 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 2 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1355 Sto-Chr8 8647482 8651264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1355 1 777 Acyl Lipid Metabolism Gene Families AT5G04040 73.913 0.0 1209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1355 K14674 - gmx:100791261 1268.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1355 8 8647482 8651264 Sto13g2811 13 33532448 33535860 CCT
Sto8g1355 8 8647482 8651264 Sto8g1355 8 8647482 8651264 ECH