Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2811 ATGGATGTAAGTAATGAGGCTAGTGTTGACCTTTTTTCAATTGGGCCGTCGGGTATTCTGGGTCGAACAATTGCTTTCAAAGTTCTTTTCTGTAAGTCTATATCACATCTGAAGCATGAGGTATTTCATGCATTGTTGAATATCATCTATAGGTTTAGGAGACTTGTAGCACCCATTATATCATGGTTGCATCCAAGAAATCCACAGGGGATATTAGCAATGATGactataattgctttcttgttGAGACGTTATACAAATGTGAAGGTAAAGGCTGAAATGGCATATCGGAGGAAATTTTGGAGGAATATGATGAGAACTGCATTGACATATGAAGAGTGGGCTCATGCAGCTAAGATGCTTGATAAAGAGACTCCAAAGATGAATGAATCAGAACATTATGATGTAGAATTAGTGAGGAGTAAGCTTCAAGAGCTCCGCCACCGTAGGCATGAGGGATCTCTTAGagatataatattttgtatGCGTGCTGATCTTGTTAGAAATCTAGGTAATATGTGTAACCCTGAGCTTCACAAAGATAGGCTTCAGGTGCCTAAACTAATCAAGGAGTATATTGATGAGGTATCAACTCAGTTGAGAATGGTCTGTGACTCTGATTCAGAGGAGCTCTCATTGGAAGAAAAGCTTGCTTTCATGCATGAAACTAGACATGCATTTGGGAGGACTGCTTTGCTGTTGAGTGGGGGTGCTTCTCTCGGAGCTTTTCATGTTAGTGTAGTTAAAACACTGGTAGAGCATAAACTCTTGCCTAGGATTATTGCTGGTTCAAGTGTTGGCTCTATTATGTGTGCTGTTGTTGCTACTAGGTCTTGGCCTGAGCTTCAAAGCTTTTTTGAGCATTCATGGTACTCATTGCAATTTTTTGATCAAATGGGTGGGATTTTTACAGTTGTGAAGAGAATCATGACACGAGGTGCTGTTCATGAGATCAGACACTTGCAAATGATGTTAAGGCATCTAACAAGCAACCTTACATTTCAAGAAGCTTATGACATGACGGGTCGAATTCTTGGGATAACTGTTTGTTCCCCAAGAAGACATGAACCGCCTAGATGTCTTAACTATTTGACTTCTCCCCATGTTGTTATATGGAGTGCAGTCACTGCTTCTTGTGCCTTTCCTGGCCTCTTTGAGGCTCAGGAACTGATGGCAAAGGATAGAAGTGGAGAGATTGTCCCATACCATCCTccattcaatttgggacctgaGGAGGGATCTACACCAGTGCGACGCTGGAGGGATGGTAGCTTGGAGATTGATTTACCTATGATACAGCTGAAAGAGCTGTTCAATGTTAATCATTTTATTGTCAGCCAGGCCAATCCACATATTACACCACTTTTGAGACTGAAAGACTTTATAAGAGCTTATGGAGGGAATTTTGCTGCCAAGCTTGCTCATCTTACTGAGATGGAGGTAAAACATAGATGTAATCAAATACTGGAACTTGGCTTTCCATTAGGTGGACTTGCCAAGCTGTTCGCTCAAGACTGGGAGGGCGATGTAACTGTTGTTATGCCCGCAACTCTTGCTCAGTACTCAAAAATCATACAAAACCCGTCCTATGTGGAGCTTCAAAAGGCAGCTAACCAAGGGAGAAGGTGCACCTGGGAGAAGCTTTCAGCCATAAAAGCAAATTGCGGCATTGAACTTGCTCTTGATGAATCTGTAGCAATTCTCAATCATATGAGAAGACTCAAGAGAAGTGCTGAAAGAGCAGCTGCTGCTTCTTCTCATGGCCAGGCCAGTACTGTCAAATTCAGTGCTTCTAGAAGAATACCTTCCTGGAATTGCATTGCACGAGAGAATTCAACAGGATCCCTAGAGGAAGACCTAGTAGATGTCACTTCCTCATTGCATCAAGGTGTTAGTGGTAAAAATTGGAAAACCCACCGTGGCATACATGATGGAAGCGACAGTGAATCAGAAAGTGTTGATTTCAATTCTTGGACGCGGTCTGGCGGCCCTTTGATGAGAACTACTTCAGCAAATATGTTCATTGACTTTTTCCAAAACTTAGATGTTGATACTGACCTACATAATAGAGGCATGGTAGCTCATCCTAATGCTCAAGTTTTTCAGCATAATCACAGTCCTAGAGTGACAACTCCAGATAGGAGTTCTGAAGGCACAGATTTTGATCGAGAAACTGACAATAGGTTAGTCATGAATGGATCTAGCATAATGGTAATTGAAGGTGATCTTTTGCAACCCGAACGAATCCAAAACGGTATTGTGTTTAATGTTGTCAAGAGAGAAGACTTGACAACTCCTTTGAATAGGAATCGTGAATTTGAGAATTACCCCAATGAAAGTGCTGAATGTGTCCAAATTGACTGTCCAGGGAGGGAGATGGATGCTGCTAGCACAAGCACAACGTCTGAAGTTGGAGATGATGATCCCTCAGCAACCAAGTCCCTAATGGAAACGCCTGCGTTTAATTCTGTGGATCATTCTATCACAACAGATGTAGATTGTATTGTTGAGGAATGTACGGAAGAAAATTTATATAGGAAAATTTCCACTACGACagtcaaatatttaacttaCACTCCTGCTCTTGAATTCATTGTTGTCTCTGTTCCTATTTCCCTCTTGCCTCTAAATCTTTCTGCTCTTGTCAACcaactttaa 2658 0.4067 MDVSNEASVDLFSIGPSGILGRTIAFKVLFCKSISHLKHEVFHALLNIIYRFRRLVAPIISWLHPRNPQGILAMMTIIAFLLRRYTNVKVKAEMAYRRKFWRNMMRTALTYEEWAHAAKMLDKETPKMNESEHYDVELVRSKLQELRHRRHEGSLRDIIFCMRADLVRNLGNMCNPELHKDRLQVPKLIKEYIDEVSTQLRMVCDSDSEELSLEEKLAFMHETRHAFGRTALLLSGGASLGAFHVSVVKTLVEHKLLPRIIAGSSVGSIMCAVVATRSWPELQSFFEHSWYSLQFFDQMGGIFTVVKRIMTRGAVHEIRHLQMMLRHLTSNLTFQEAYDMTGRILGITVCSPRRHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEEGSTPVRRWRDGSLEIDLPMIQLKELFNVNHFIVSQANPHITPLLRLKDFIRAYGGNFAAKLAHLTEMEVKHRCNQILELGFPLGGLAKLFAQDWEGDVTVVMPATLAQYSKIIQNPSYVELQKAANQGRRCTWEKLSAIKANCGIELALDESVAILNHMRRLKRSAERAAAASSHGQASTVKFSASRRIPSWNCIARENSTGSLEEDLVDVTSSLHQGVSGKNWKTHRGIHDGSDSESESVDFNSWTRSGGPLMRTTSANMFIDFFQNLDVDTDLHNRGMVAHPNAQVFQHNHSPRVTTPDRSSEGTDFDRETDNRLVMNGSSIMVIEGDLLQPERIQNGIVFNVVKREDLTTPLNRNREFENYPNESAECVQIDCPGREMDAASTSTTSEVGDDDPSATKSLMETPAFNSVDHSITTDVDCIVEECTEENLYRKISTTTVKYLTYTPALEFIVVSVPISLLPLNLSALVNQL 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2811 885 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 3 709 - -
Sto13g2811 885 MobiDBLite consensus disorder prediction 704 723 - -
Sto13g2811 885 SUPERFAMILY FabD/lysophospholipase-like 228 573 IPR016035 -
Sto13g2811 885 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 232 435 IPR002641 GO:0006629
Sto13g2811 885 CDD Pat_SDP1-like 162 569 - -
Sto13g2811 885 Pfam Domain of unknown function (DUF3336) 94 225 IPR021771 GO:0004806|GO:0006629
Sto13g2811 885 Gene3D Cytosolic phospholipase A2 catalytic domain 229 311 - -
Sto13g2811 885 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 3 709 - -
Sto13g2811 885 Pfam Patatin-like phospholipase 232 411 IPR002641 GO:0006629
Sto13g2811 885 Gene3D Cytosolic phospholipase A2 catalytic domain 312 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2811 Sto-Chr13 33532448 33535860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2811 1 799 Acyl Lipid Metabolism Gene Families AT5G04040 75.589 0.0 1241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2811 K14674 - zju:107431632 1341.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1355 8 8647482 8651264 Sto13g2811 13 33532448 33535860 CCT
Sto13g2811 13 33532448 33535860 Sto13g2811 13 33532448 33535860 ECH