Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1314 ATGGACCTTAATCCCGAAGACCCCACCCTCCACCTTCCGGCTCCGACCGCCGCCCGTGCGCCTGAGCCACCGTCACCGTCGCATCGCCGATCTGTCTGCTCCAACTGCTCGCGGCCCAATCCGGTGTGCCTCTGCCATGTCCTTCCCGCGCGGCCCATCCATACCGCAACCCGAGTTGTGATCCTCCACCACCCACACGAGGCACAACACAAGCTCTCCACCACTCCAATCCTCACCAAAACCCTACTCAATGCCACTGCCATTGTCGGCCGCCGCCTCCGCCCTGGCCTCTCCCCACTGCTCGACAAATCACCCAAGGCAGTGTATCTCTTTCCGCCGACCAATTCCTCGCCGGCTGTCAACATCGACCATCTCGAAGCATCGGATTGGATCCGAAACCATGGAGAGGATTTGGTTTTGATTGCTTTTGATGGGACTTGGAAGCACGCGAGGGAGATGGTGAAGGCCAGCGAGGAATTCCTTTCCAAGTTCGCTACTAGGGTTTGTTTGGAGGTTGATGAGAAAGTGAGTGGTGGATGTATATATGACTCCGAATTGATTTTGAGAAAGGAACCTTTCTCTGGGTGTGTGAGTACTATGGAGGCGGTGGCAAGAGCTTTGAGAGTGCTTGAGCCAAATGGGTTAGAGATTGAGAGCACATTAATTAAGATTCTGAGGGAAATGGTGAGCATTATATTGTTTGATTTACGTCTGGATGATATTGAGGTAACATTGATTGGATTTCGAGtgaaaaatcaattcaatgcCCTGTCTGTCGTTTACAGTCCTCCGTATGTTTCTTCGGTCATTTTAACCAAGTTCAGAGCTATTGTCGAATCACGAATTGTATTTCTATGCCTATCATCCAGCGTATTGCTATCCGCACTTTGCAATTTCCACTTAAGGAACTGGGCAACTTGGAACGACATGGAATGGGATATGTTAATATTTGATTCGGAATGGACTACTTTGGAATTTGCATCCATTGTGACTGTGCGTTTACTGGTGAAGCCAGTAATTAAGAAGGAATTTCAACCATGTCTAACGCTACAAAAGTTCTGGATCCTGCCTTCCAGGGAGTGGGTCAAAGAGCACTTAACTTCTTGTAGAGGCACTGAAATGTGGAGGATTGAGAATTTTCAGCCAGTTCCGGTGCCCAAATCTGAATATGGTAAATTCTACATGGGAGATTCTTACATCATCTTGCAGTGCACAATATCACTAACTTTCTTTAGTTCTCTTGAGATTATGATCAACAATGTTATGATGATTATCTTACTGGAAACTACAACACAAGGGAAAGCAGGCTCTTATTTTTATGATATACACTTTTGGATTGGAAAGGACACAAGTCAGGATGAGGCTGGAACAGCCGCCATCAAAACTGTTGAACTTGATGCTGCACTTGGAGGACGTGCAGTGCAGCACAGGGAACTCCAAGGCCATGAATCTGACAAGTTTTTGTCCCACTTTAAACCATGTATCATACCTTTAGAAGGCGGTGTTGCATCTGGATTTAGAAAACCTGAAGAAGAGGAGTTTGAAACACGTTTGTACATATGCAAGGGAAAACGAGTTGTTCCTTTTGCACGGTCTTCACTGAATCATGATGATGTTTTTATACTAGACTCTCAGAACAAAATTTATCAGTTCAATGGTGCAAATTCTAATATTCAGGAGAGAGCTAAGGCTTTAGAAGTAATTCAGTTTTTGAAGGAGAAGTATCATGACGGGGTATGCGACGTTGCAATTGTCGATGATGGAAGGTTGGATACCGAATCAGACTCAGGTGAATTTTGGGTCCTTTTTGGTGGTTTTGCTCCCATTGGAAAGAAGGTCATCAGTGAGGATGATATCATTCCAGAGGCCACTCCCGCTCAACTTTATAACATTGTTGAAGGTGAAGTCAATCCTGTGGAAGGTGAACTGTCCAAAACACTATTGGAGAATAACAAATGCTTTATACTGGACTGTGGGGCTGAGGTATTTGTTTGGGTTGGCCGGCTAACACAAGTTGAAGAGAGAAAAGCAGCCTGTCAAGCAGCTGAGGAGTTTGTTACAAGTCAAAATAGGCCAAAATCTACAAAGATAACCAGGTTAATTCAAGGCTATGAGACACATCCATTTAAGTCAAACTTTGATTCTTGGCCAACAGGATCTACTACTACTGGTACTGAGGAAGGAAGAGGAAAAGTTGCAGCCTTGGTGAAGCAACAAGGTATGGGTGTCAAAGGAATGTCAAAAAATACTGCAGTAATTGAGGAAATTCCTCCTCTTCTCGAAGGAGGTGGAAAGATGGAGGTATGGTTGATTGATGGAGGTAACAAGAGTCCATTGCCTAAAGAGGATATAGGAAAGTTTTATAGTGGAGATTGCTACATAGTACTGTACACTTACCACGCTGGTGGTGAGAGGAAGGAAGACTACTTCTTGTGCTGTTGGTTTGGAAAAGACAGTATTGAGGAGGATCAAAGGATGGCAACTCAGTTGGCCAATACTATGTTCAACTCTCTAAAGGGTAGACCTGTTCAGGGTCGCATATTTGAAGGTAAAGAACCACCACagtttatttctctttttcagCCTATGGTGATACTAAAGGGAGGTTTGAGCTCTGGTTACAAACAATTACTAGCTGACAAAGATTTGGCAGACGAGACATACACTGCAGAGGGTATTGCACTCATTCAAATTTGTGGAAGTTCCAATTACAACAAAAAAGCAGTGCAAGTTGATGCAGTGGCAACATCATTAAATTCCATGGAGGTTTTCCTCCTACAATCCAGTTCAGCAATTTTCATTTGGCATGGAAATCAATCTTCTTTTGAGCAGCAACAGGTAGCAGCAAAAGTTGCAGAATTTTTGAAGCCAGGAGTTCCTTTAAAACACGCCAAAGAAGGAACAGAAAGTTCAGCCTTCTGGTCTGCACTGGGAGGAAAAGAAAGTTACACCAGCGAAAAAGTCACTAATGACGCTGTGAGGGATCCACATTTGTTCACCTTCTCATTCAATAAAGGAAAGTTTCAGGTTGAGGAGCTTTACAATTTCTCCCAAGATGATCTGTTGACGGAGGATATGCTCATACTTGACGCGCCTGCAGGAGTGTTTGTCTGGGTTGGTCAGTCTGTGGACCCAAAAGAGAAGCAAAGTGCTTTTGAAATTGGCCAGAAATACATAGATTTGGCTGCATCTCTGGAAGGACTGCCTCCTCATGTGCCACTATATAAAGTCACGGAAGGGAACGAACCTTGCTTCTTCACGGCGTACTTTTCATGGGACCATGCAAAAGCTATTGTTCTAGGAAACTCGTTCCAGAAAAAGGTGACACTACTTTTTGGGATTGGCCATGCTGTGGAGGACAAGTCTGATGGATCTGGCCCAAGACAAAGGGCAGAAGCCTTGGCTGCCTTATCTTCTGCATTTAATTCATCTTCTGATAAAGCATACAATATGGCACAGGAAAGATTGAATGAACTAAATCAAGGAGGACCAAGACAAAGAGCAGAAGCTTTAGCTGCCTTAAATTCTGCTTTTAATTCGTCGTCAGGAACTAAAACTTCTGCTCCCAAGCCTTCGGGAACAGGTCAAGGATCTCAAAGAGCAGCAGCAGTAGCTGCTCTTTCATCAGTTCTCACTGCTGAAAAGAGGTACACACCTGATTCTTCTCCAACCAGTGGAAGTCCTGTAGCAGAAAGTGAAGGTAAGAGTGAAATTGGACATGCTGAAACAGAATGCCCTGAAGAAGCTGAAGATGCTGAACTTGCCCCTGAAACTGGTGACAATGGGGATTCAGAGCCAAAACAAGAAAGCATGGAGGATGAAAATGTTATTCCAAGTACTGATGAGACATTTAGTTATGATCAATTAAAGAATCATTCCGAGAATCCTGTGTCTGGAATTGATTATAAACGGAGAGAGGCTTATCTGTCAGATGATGAATTTGAATCTGTATTTGGAATGACAAAAGAAGCATTTTATGAAATTCCAAAATGGAAGCAAGACATGCAGAAAAAGAAACTTGTTGATTGTGATGCTTCCTGGAAAGTAATTTTAATTGATTGTGATGTTTACGTTTTGTAG 4080 0.4336 MDLNPEDPTLHLPAPTAARAPEPPSPSHRRSVCSNCSRPNPVCLCHVLPARPIHTATRVVILHHPHEAQHKLSTTPILTKTLLNATAIVGRRLRPGLSPLLDKSPKAVYLFPPTNSSPAVNIDHLEASDWIRNHGEDLVLIAFDGTWKHAREMVKASEEFLSKFATRVCLEVDEKVSGGCIYDSELILRKEPFSGCVSTMEAVARALRVLEPNGLEIESTLIKILREMVSIILFDLRLDDIEVTLIGFRVKNQFNALSVVYSPPYVSSVILTKFRAIVESRIVFLCLSSSVLLSALCNFHLRNWATWNDMEWDMLIFDSEWTTLEFASIVTVRLLVKPVIKKEFQPCLTLQKFWILPSREWVKEHLTSCRGTEMWRIENFQPVPVPKSEYGKFYMGDSYIILQCTISLTFFSSLEIMINNVMMIILLETTTQGKAGSYFYDIHFWIGKDTSQDEAGTAAIKTVELDAALGGRAVQHRELQGHESDKFLSHFKPCIIPLEGGVASGFRKPEEEEFETRLYICKGKRVVPFARSSLNHDDVFILDSQNKIYQFNGANSNIQERAKALEVIQFLKEKYHDGVCDVAIVDDGRLDTESDSGEFWVLFGGFAPIGKKVISEDDIIPEATPAQLYNIVEGEVNPVEGELSKTLLENNKCFILDCGAEVFVWVGRLTQVEERKAACQAAEEFVTSQNRPKSTKITRLIQGYETHPFKSNFDSWPTGSTTTGTEEGRGKVAALVKQQGMGVKGMSKNTAVIEEIPPLLEGGGKMEVWLIDGGNKSPLPKEDIGKFYSGDCYIVLYTYHAGGERKEDYFLCCWFGKDSIEEDQRMATQLANTMFNSLKGRPVQGRIFEGKEPPQFISLFQPMVILKGGLSSGYKQLLADKDLADETYTAEGIALIQICGSSNYNKKAVQVDAVATSLNSMEVFLLQSSSAIFIWHGNQSSFEQQQVAAKVAEFLKPGVPLKHAKEGTESSAFWSALGGKESYTSEKVTNDAVRDPHLFTFSFNKGKFQVEELYNFSQDDLLTEDMLILDAPAGVFVWVGQSVDPKEKQSAFEIGQKYIDLAASLEGLPPHVPLYKVTEGNEPCFFTAYFSWDHAKAIVLGNSFQKKVTLLFGIGHAVEDKSDGSGPRQRAEALAALSSAFNSSSDKAYNMAQERLNELNQGGPRQRAEALAALNSAFNSSSGTKTSAPKPSGTGQGSQRAAAVAALSSVLTAEKRYTPDSSPTSGSPVAESEGKSEIGHAETECPEEAEDAELAPETGDNGDSEPKQESMEDENVIPSTDETFSYDQLKNHSENPVSGIDYKRREAYLSDDEFESVFGMTKEAFYEIPKWKQDMQKKKLVDCDASWKVILIDCDVYVL 1359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1314 1359 ProSiteProfiles Headpiece (HP) domain profile. 1278 1343 IPR003128 GO:0003779|GO:0007010
Sto8g1314 1359 SUPERFAMILY Actin depolymerizing proteins 366 524 - -
Sto8g1314 1359 Gene3D Severin 896 985 IPR029006 -
Sto8g1314 1359 SUPERFAMILY VHP, Villin headpiece domain 1281 1340 IPR036886 GO:0003779|GO:0007010
Sto8g1314 1359 Gene3D Villin headpiece domain 1282 1341 IPR036886 GO:0003779|GO:0007010
Sto8g1314 1359 SUPERFAMILY Actin depolymerizing proteins 595 718 - -
Sto8g1314 1359 PANTHER VILLIN 426 1339 IPR007122 GO:0051015
Sto8g1314 1359 PANTHER VILLIN 371 405 IPR007122 GO:0051015
Sto8g1314 1359 Gene3D Severin 509 614 IPR029006 -
Sto8g1314 1359 SMART DTW_2a 29 237 IPR005636 -
Sto8g1314 1359 Pfam Villin headpiece domain 1308 1340 IPR003128 GO:0003779|GO:0007010
Sto8g1314 1359 PRINTS Gelsolin family signature 695 716 IPR007122 GO:0051015
Sto8g1314 1359 PRINTS Gelsolin family signature 783 799 IPR007122 GO:0051015
Sto8g1314 1359 PRINTS Gelsolin family signature 843 863 IPR007122 GO:0051015
Sto8g1314 1359 PRINTS Gelsolin family signature 906 926 IPR007122 GO:0051015
Sto8g1314 1359 PRINTS Gelsolin family signature 966 985 IPR007122 GO:0051015
Sto8g1314 1359 PRINTS Gelsolin family signature 1018 1040 IPR007122 GO:0051015
Sto8g1314 1359 PRINTS Gelsolin family signature 1047 1066 IPR007122 GO:0051015
Sto8g1314 1359 CDD gelsolin_S3_like 634 715 - -
Sto8g1314 1359 MobiDBLite consensus disorder prediction 1178 1205 - -
Sto8g1314 1359 SUPERFAMILY Actin depolymerizing proteins 506 609 - -
Sto8g1314 1359 MobiDBLite consensus disorder prediction 1 32 - -
Sto8g1314 1359 Pfam DTW domain 30 232 IPR005636 -
Sto8g1314 1359 MobiDBLite consensus disorder prediction 1260 1274 - -
Sto8g1314 1359 Pfam Gelsolin repeat 907 971 IPR007123 -
Sto8g1314 1359 Pfam Gelsolin repeat 637 709 IPR007123 -
Sto8g1314 1359 Pfam Gelsolin repeat 526 585 IPR007123 -
Sto8g1314 1359 Pfam Gelsolin repeat 778 857 IPR007123 -
Sto8g1314 1359 Pfam Gelsolin repeat 380 488 IPR007123 -
Sto8g1314 1359 CDD gelsolin_S2_like 515 604 - -
Sto8g1314 1359 SMART VHP_1 1308 1340 IPR003128 GO:0003779|GO:0007010
Sto8g1314 1359 CDD gelsolin_S6_like 995 1093 - -
Sto8g1314 1359 Gene3D Severin 987 1101 IPR029006 -
Sto8g1314 1359 SMART VILL_6 624 716 IPR007122 GO:0051015
Sto8g1314 1359 SMART VILL_6 764 863 IPR007122 GO:0051015
Sto8g1314 1359 SMART VILL_6 893 980 IPR007122 GO:0051015
Sto8g1314 1359 SMART VILL_6 370 494 IPR007122 GO:0051015
Sto8g1314 1359 SMART VILL_6 516 606 IPR007122 GO:0051015
Sto8g1314 1359 SMART VILL_6 997 1092 IPR007122 GO:0051015
Sto8g1314 1359 SUPERFAMILY Actin depolymerizing proteins 969 1091 - -
Sto8g1314 1359 PANTHER VILLIN-3-LIKE ISOFORM X1 371 405 - -
Sto8g1314 1359 PANTHER VILLIN-3-LIKE ISOFORM X1 426 1339 - -
Sto8g1314 1359 SUPERFAMILY Actin depolymerizing proteins 754 903 - -
Sto8g1314 1359 MobiDBLite consensus disorder prediction 1214 1231 - -
Sto8g1314 1359 Gene3D Severin 760 895 IPR029006 -
Sto8g1314 1359 Gene3D Severin 360 508 IPR029006 -
Sto8g1314 1359 SUPERFAMILY Actin depolymerizing proteins 892 984 - -
Sto8g1314 1359 MobiDBLite consensus disorder prediction 1178 1292 - -
Sto8g1314 1359 CDD gelsolin_S4_like 758 860 - -
Sto8g1314 1359 CDD gelsolin_S5_like 892 980 - -
Sto8g1314 1359 Gene3D Severin 622 727 IPR029006 -
Sto8g1314 1359 CDD gelsolin_S1_like 371 501 - -
Sto8g1314 1359 MobiDBLite consensus disorder prediction 1277 1292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1314 Sto-Chr8 8287035 8304924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1314 - - gmx:100788765 1460.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1314 8 8287035 8304924 Sto13g2845 13 33807208 33815523 CCT