Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2845 ATGTCTAGCGCTACAAAAGTTTTGGATCCTGCATTCCAGGCAGTGGGTCAAAGAGTAGGGACTGAAATATGGAGGATTGAGAATTTTCAGCCAGTTCCATTACCCAAATCTGAGTATGGAAAATTCTACATGGGAGATTCATACATTATTTTACAGACATCACAAGGCAAAGGAGGGACTTATTTTTATGACATTCATTTCTGGATTGGAAAGGATACAAGTCAGGATGAAGCAGGGACGGCTGCCATCAAAGCTGTTGAACTTGATGCATCTCTTGGAGGACGTGCAGTGCAGCACAGGGAAGTTCAAGGCCATGAATCTGACAAATTTTTGTCATACTTCAAACCATGTATAATACCATTAGAGGGAGGTGTTGCAACTGGATTTAAAAAACCTGAAGAAGAAGTGTTTGAAACACGCTTGTACATATGCAAAGGAAAACGAGTTGTCAGAATGAAACAGGTCCCTTTTGCACGGTCTTCTCTGAACCATGATGATGTATTTATCCTTGACACTAAGAACAAGATTTATCAATTCAATGGAGCAAATTCAAATATTCAGGAAAGAGCCAAGGCTTTAGAAGTAATCCAGTTTCTGAAGGACAAGTATCATGAGGGGAAATGTGACATAGCAATTGTTGATGATGGCAAGTTGGACACAGAGTCAGATTCTGGTGAATTTTGGGTACTCTTTGGTGGTTTTGCTCCAATTGGAAAGAAGGTCATCAGTGAGGATGATATTATTCCAGAGACTACTCCCGCTCAACTTTATAGTATTGCTGACGGTGAGGTCAAGCCTATTGAAGGTGAACTGTCTAAAGCACTGCTGGAGAATAACAAATGCTATTTAGTGGACTGTGGTGCTGAGGTATTTGTGTGGGTTGGTCGGGTAACACAGGTTGAAGAACGAAAAGCAGCGTGCCAAGCAGCTGAGGAGTTTGTTGCAAGTCAAAATAGGCCAAAATCTACACGGATAACCAGAATTATTCAGGGTTATGAGACACATTCATTCAAGTCCAACTTTGATTCTTGGCCATCAGGATCTGCTACTACAGGTGCTGAGGAAGGGAGAGGAAAAGTTGCAGCTTTGCTGAAGCAACAAGGTGTGGGTGTCAAGGGAATGACAAAAAGTACTCCTGTCAACGAAGAAGTTCCACCTCTGCTTGAAGGAGGTGGAAAGATGGAGGTATGGCTGATCAATGGAAGTGCCAAGAATATATTGCCTAAGGAGGATATCGGTAAATTTTACAGTGGAGATTGTTACATAGTATTGTACACTTACCATTCTGGTGAGAGGAAAGAAGACTACTTCTTGTGTTGTTGGTTTGGGAAAGACAGCATTGAGGAGGACCAAAGGATGGCTACTCGATTGGCCAATACAATGTCCAACTCACTAAAGGGTAGACCTGTTCAGGGCCGCATCTTTGAAGGTAAAGAACCACCACAATTTGTTGCTCTTTTTCAGCCTATGGTGGTCCTTAAGGGAGGCGTGAGCTCTGgttacaaaaaattaatagcTGAGAAAGGTTTGCCAGATGAGACGTACACAGCAGAAAGTATTGCACTTATTCGAATTTCTGGAACATCCATTCATAATAATAAAGCAGTGCAAGTTGACGCAGTGGCAACATCATTAAATTCTACTGAGTGCTTCATCCTGCAATCTGGCTCATCAATGTTCACGTGGCATGGAAACCAATGTTCTTTTGAGCAGCAGCAGCTAGGGGCAAAAGTTGCTGAATTTTTGAAGCCAGGAGTTGTTTTAAAACATGCTAAAGAGGGAACAGAAAGCTCAGCTTTCTGGTTTGCACTTGGAGGAAAACAAAGCTACACCAGCAAAAAAGCCACTAATGACGTCGTTAGAGATCCACATTTGTTCACATTTTCATTAATCAAAGATTCACCAGGAAAGTTTCAGGTAGAAGAGGTGTACAACTTTTCCCAAGATGATCTGTTGACAGAGGATATCCTTATACTTGATACACATGCTGAAGTGTTTGTTTGGGTTGGTCAGTCTGTGGACTCGAAAGAAAAGCAAAATGTTTTTGAAATTGGCCAGAAATATATAGATATGGCTGCATCTCTGGAGGGACTCTCTCCTCATGTACCACTATATAAAGTCACAGAAGGGAATGAACCTTGCTTCTTCACGACATACTTTTCATGGGATAATGCGAAAGCTACTGTTCAAGGAAACTCATTCCAGAAAAAGGTCTCATTACTCTTTGGGATTGGCCATGCTGTCGAGGATAAGTCCAATGGGTCAAGTCAAGGAGGACCAAGGCAAAGAGCAGAAGCTTTAGCAGCCTTATCTTCTGCGTTTAATTCATCTTCCGATAGAACATCCAGTATGGCCCAGGATAGACTGAATGGACTAAACCAAGGTGGTCCAAGACAAAGAGCTGAAGCTTTAGCTGCCTTAAACTCTGCGTTTAATTCATCATCTGGAAGTAAAACTGGTGCTGCAAGGCCGGTTGGCACGAGTCAGGGATCACAAAGAGCAGCTGCTGTAGCTGCTCTTTCTAATGTTCTTACTGCTGAAAAGAAGAAGCAATCGCCAGATGCCTCTCCTCTTGTGGGAAGCAGTAGTCCTCCTGAGGAAAGTAGCGCTTCTGCAGAAGCTAAAAGTGAAAGCGGTCTCTCTGAAACAGAAGGTCCTGAAGTAGTTGCAGAAGCCAAGGAGACAGGGGATCTTGCGCCTGAAACTGGTAGCAATGGGGATTTAGAACCAAAACAGGAAATTGTTGAGGATGGGAACGATGGTCAAAGTAGTCAGAGAACGTTCAGTTATGATCAGTTGAAGACAAAATCTACTAATCCTGTGTCTGGAATTGATTTTAAACGCAGGGAGGCCTATCTGTCAGATGAAGACTTCCAAACTGTTTTTGGAATGAAAAAAGAAGCATTCTATAAATTGCCAAAATGGAAGCAAGACATGCAGAAACGGAAAGCTGATTTGTTTTAG 2964 0.4217 MSSATKVLDPAFQAVGQRVGTEIWRIENFQPVPLPKSEYGKFYMGDSYIILQTSQGKGGTYFYDIHFWIGKDTSQDEAGTAAIKAVELDASLGGRAVQHREVQGHESDKFLSYFKPCIIPLEGGVATGFKKPEEEVFETRLYICKGKRVVRMKQVPFARSSLNHDDVFILDTKNKIYQFNGANSNIQERAKALEVIQFLKDKYHEGKCDIAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIIPETTPAQLYSIADGEVKPIEGELSKALLENNKCYLVDCGAEVFVWVGRVTQVEERKAACQAAEEFVASQNRPKSTRITRIIQGYETHSFKSNFDSWPSGSATTGAEEGRGKVAALLKQQGVGVKGMTKSTPVNEEVPPLLEGGGKMEVWLINGSAKNILPKEDIGKFYSGDCYIVLYTYHSGERKEDYFLCCWFGKDSIEEDQRMATRLANTMSNSLKGRPVQGRIFEGKEPPQFVALFQPMVVLKGGVSSGYKKLIAEKGLPDETYTAESIALIRISGTSIHNNKAVQVDAVATSLNSTECFILQSGSSMFTWHGNQCSFEQQQLGAKVAEFLKPGVVLKHAKEGTESSAFWFALGGKQSYTSKKATNDVVRDPHLFTFSLIKDSPGKFQVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQNVFEIGQKYIDMAASLEGLSPHVPLYKVTEGNEPCFFTTYFSWDNAKATVQGNSFQKKVSLLFGIGHAVEDKSNGSSQGGPRQRAEALAALSSAFNSSSDRTSSMAQDRLNGLNQGGPRQRAEALAALNSAFNSSSGSKTGAARPVGTSQGSQRAAAVAALSNVLTAEKKKQSPDASPLVGSSSPPEESSASAEAKSESGLSETEGPEVVAEAKETGDLAPETGSNGDLEPKQEIVEDGNDGQSSQRTFSYDQLKTKSTNPVSGIDFKRREAYLSDEDFQTVFGMKKEAFYKLPKWKQDMQKRKADLF 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2845 987 MobiDBLite consensus disorder prediction 775 793 - -
Sto13g2845 987 SMART VILL_6 251 344 IPR007122 GO:0051015
Sto13g2845 987 SMART VILL_6 137 234 IPR007122 GO:0051015
Sto13g2845 987 SMART VILL_6 19 117 IPR007122 GO:0051015
Sto13g2845 987 SMART VILL_6 392 490 IPR007122 GO:0051015
Sto13g2845 987 SMART VILL_6 518 607 IPR007122 GO:0051015
Sto13g2845 987 SMART VILL_6 624 722 IPR007122 GO:0051015
Sto13g2845 987 MobiDBLite consensus disorder prediction 775 798 - -
Sto13g2845 987 Pfam Villin headpiece domain 952 987 IPR003128 GO:0003779|GO:0007010
Sto13g2845 987 SUPERFAMILY Actin depolymerizing proteins 596 721 - -
Sto13g2845 987 Gene3D Severin 133 245 IPR029006 -
Sto13g2845 987 CDD gelsolin_S6_like 622 723 - -
Sto13g2845 987 SUPERFAMILY Actin depolymerizing proteins 383 528 - -
Sto13g2845 987 SMART VHP_1 952 987 IPR003128 GO:0003779|GO:0007010
Sto13g2845 987 CDD gelsolin_S4_like 386 487 - -
Sto13g2845 987 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Sto13g2845 987 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Sto13g2845 987 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Sto13g2845 987 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Sto13g2845 987 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Sto13g2845 987 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Sto13g2845 987 PRINTS Gelsolin family signature 648 670 IPR007122 GO:0051015
Sto13g2845 987 PRINTS Gelsolin family signature 677 696 IPR007122 GO:0051015
Sto13g2845 987 ProSiteProfiles Headpiece (HP) domain profile. 922 987 IPR003128 GO:0003779|GO:0007010
Sto13g2845 987 Gene3D Severin 389 517 IPR029006 -
Sto13g2845 987 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Sto13g2845 987 PANTHER VILLIN 1 987 IPR007122 GO:0051015
Sto13g2845 987 MobiDBLite consensus disorder prediction 846 878 - -
Sto13g2845 987 Gene3D Severin 614 738 IPR029006 -
Sto13g2845 987 Gene3D Severin 518 613 IPR029006 -
Sto13g2845 987 PANTHER VILLIN-3-LIKE ISOFORM X1 1 987 - -
Sto13g2845 987 CDD gelsolin_S5_like 519 609 - -
Sto13g2845 987 SUPERFAMILY VHP, Villin headpiece domain 923 987 IPR036886 GO:0003779|GO:0007010
Sto13g2845 987 SUPERFAMILY Actin depolymerizing proteins 510 615 - -
Sto13g2845 987 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Sto13g2845 987 Gene3D Severin 246 356 IPR029006 -
Sto13g2845 987 CDD gelsolin_S3_like 254 343 - -
Sto13g2845 987 Pfam Gelsolin repeat 408 483 IPR007123 -
Sto13g2845 987 Pfam Gelsolin repeat 149 217 IPR007123 -
Sto13g2845 987 Pfam Gelsolin repeat 29 111 IPR007123 -
Sto13g2845 987 Pfam Gelsolin repeat 532 583 IPR007123 -
Sto13g2845 987 Pfam Gelsolin repeat 638 716 IPR007123 -
Sto13g2845 987 Pfam Gelsolin repeat 264 337 IPR007123 -
Sto13g2845 987 Gene3D Villin headpiece domain 911 987 IPR036886 GO:0003779|GO:0007010
Sto13g2845 987 Gene3D Severin 5 132 IPR029006 -
Sto13g2845 987 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Sto13g2845 987 MobiDBLite consensus disorder prediction 846 941 - -
Sto13g2845 987 CDD gelsolin_S1_like 12 124 - -
Sto13g2845 987 CDD gelsolin_S2_like 138 232 - -
Sto13g2845 987 MobiDBLite consensus disorder prediction 917 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2845 Sto-Chr13 33807208 33815523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2845 - - gmx:100788765 1641.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1314 8 8287035 8304924 Sto13g2845 13 33807208 33815523 CCT