Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1201 ATGCTGAGCGTGCTACGCGTGCACCTCCCCTCTGATATACCCATTGTAGGCTGTGAACTCACGCCGTACGTACTCCTACGGCGGCCCGACAAGACTGTTACCACCGACGATGTGCCAGAGGCGGCTCCATTAGACGGCCATTTCTTGCGGTACAAGTGGTATCGTGTACAAAGTGATAAAAAGGTTGCTGTCTGTAGCGTACATCCATCTGAGCAGGCCACACTGCAGTGCCTAGGTTGTGTTAAGGCCAAAATACCTGTTGCCAAAAGTTATCATTGCACCCCAAAGTGCTTTTCAGATGCATGGCAGCATCATCGTGTTCTACATGACCGTGCTGCTAGTGCagttaatgaaaatggaaatgaagaAGAGGAGGTTTTTGGTCGCTTTAATAGTTCTGCATCAAGTGCCTCCCTGACAAATGGATCAACACCTTTGTATCCAGCAGCCGTTACACAACGAAGTGGTGGTGAAACTTGGTTTGAAGTTGGACGATCTAAAACATATACCCCAACAGTTGATGACATTGGTCATATCTTAAAATTTGAGTGTGTGGTAGTTGATGCAGAGACAAAACTGCCCGTCGGTCATGTCAACACTATACTAACATCCCGTGTCATTCCTGCTCCATCCCCAAGTCCACGCCGCTTGATACCCGTTGATGGGATGGGGCATTTAGATGCAGATGGACGTTTAACATCTTCAGGAACTTTTACTGTGTTATCATACAACATTTTGTCTGATGCATATGCTTCAAATGATTTATACAGTTACTGCCCTTCTTGGGCTCTGTCTTGGCCATATCGCAGACAAAATTTGTTAAGAGAAATAGTTGGTTATCGTGCAGATATTATTTGTCTTCAGGAGGTTCAAAGTGATCATTATGAGGAATTTTTTGCTCCTGAACTGGACAAACATGGCTATTATGGTCTATATAAGAGAAAAACAAATGAGGTATATAGTGGCAACAGCAATACAATTGATGGTTGTGCAACATTTTTCCGCAGAGACAAATTTTCTCATGTGAAGAAATATGAGGTTGAATTTAATAAGGCTGCACAGTCTTTGACTGATGCCATGATTCCAACCACTCAGAAGAAAACTGCTTTAAATCGGCTTGTTAAGGATAATGTTGCACTCATAGTGGTTCTAGAAGCAAAAGTTAACAATCAGCCAATTGATAATCCAGGGAAAAGGCAACTTCTTTGTGTGGCTAATACACATGTGAACGTTCACCAAGATTTGAAGGATGTTAAACTGTGGCAGGTGCATACTCTCTTGAAAGGGTTGGAAAAAATAGCTGCAAGTGCAGACATTCCGATGCTGGTTTGTGGAGACTTTAATTCAGTTCCTGGAAGTGCCCCTCATGCACTTCTTGCAATGGGGAAGGTAGATCCAATGCATCCAGATTTAGCAGTTGACCCTCTTAATATCTTGCGCCCTTACAGCAAATTGGTTCATCAGTTGCCACTGGTTAGTGCATATTCGTCTTTTGCAAGAACAGTAGGTCTTGGTTTTGAGCAGCATAAAAGGAGACTGGACAGCGCAACAAATGAACCCCTATTCACAAATGTCACTAGAGATTTTATTGGCACTCTAGATTACATCTTTTATACAGCGGATTCTTTGGTGGTGGAATCATTATTGGAGCTATTGGACGAGGAGAGTTTAAGGAAAGATACAGCACTTCCTTCTCCTGAATGGTCCTCAGATCATATAGGTCTCTTAGCTGAGTTTCGCTGCTGCAAGAATAGATCTAGGCGTTGA 1767 0.4261 MLSVLRVHLPSDIPIVGCELTPYVLLRRPDKTVTTDDVPEAAPLDGHFLRYKWYRVQSDKKVAVCSVHPSEQATLQCLGCVKAKIPVAKSYHCTPKCFSDAWQHHRVLHDRAASAVNENGNEEEEVFGRFNSSASSASLTNGSTPLYPAAVTQRSGGETWFEVGRSKTYTPTVDDIGHILKFECVVVDAETKLPVGHVNTILTSRVIPAPSPSPRRLIPVDGMGHLDADGRLTSSGTFTVLSYNILSDAYASNDLYSYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYEEFFAPELDKHGYYGLYKRKTNEVYSGNSNTIDGCATFFRRDKFSHVKKYEVEFNKAAQSLTDAMIPTTQKKTALNRLVKDNVALIVVLEAKVNNQPIDNPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPMHPDLAVDPLNILRPYSKLVHQLPLVSAYSSFARTVGLGFEQHKRRLDSATNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIGLLAEFRCCKNRSRR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1201 588 CDD Deadenylase_CCR4 240 581 - -
Sto8g1201 588 Pfam Endonuclease/Exonuclease/phosphatase family 241 572 IPR005135 GO:0003824
Sto8g1201 588 SUPERFAMILY DNase I-like 234 582 IPR036691 -
Sto8g1201 588 Gene3D Endonuclease/exonuclease/phosphatase 208 587 IPR036691 -
Sto8g1201 588 PANTHER CARBON CATABOLITE REPRESSOR-LIKE PROTEIN 36 585 - -
Sto8g1201 588 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 36 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1201 Sto-Chr8 7587165 7593533 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1201 K12603 - gmx:100808935 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1201 8 7587165 7593533 Sto13g2950 13 34473989 34478281 CCT
Sto8g1201 8 7587165 7593533 Sto8g1201 8 7587165 7593533 ECH