Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1179 ATGGTTCAGTTTCTATCAAAACCCACCACTTTATTCGCTGCAAAGCCATCTCCACTAGGCACCTTCATCATCATACTCATCCTCTGCATTCTGAGTTTCCGTATCCTGCATTACCCTCACCACTCTTCTTCTGCACCCGCACCTTCCACTTCTCAAAATGCGTCTCACTTCCGCCATATCTTCCTCTCCTCTTCCTCCAACTTCACCATCGCCTCCTACCTCCGCGCCCTCACCCTGCACCCGCACCTCGCCGGAACAAAACTCGCCTCCGAAACCGCCCGTTAcgtcctcaaccatttcagagACATGGGCCTTCAGGCCCACACAGTGAGCTACACTGCGCTTCTCTCTTATCCTCTCCACTCCTCTATCTCGGCCCATTTCAGCGACAGCTCTTTTGTGGACCTTCTCGTAACTGAAACGGGCCGGTCCGATGTGGTGCCACCTTACCATGCGTACTCACCATCAGGATCGGCCTACGCGAAAGCGGTGTTTGTAAATTACGGAAGGCAAGAGGACTATCGTGCGCTGGGGGTGCTAGGGGTGAACGTTAGCGGATGTATAGTGATAGCGCGCAAGGGCGGCGGTTTGAGCAGAGGCGCGGTGGTTGAGACGGCGGAGGCGAATGGTGCGGTGGCCGTGCTAACGTACGCCGATGGGGACAGGTTTAGGAAGGGGTTTGAGAGAGGACACGTAATGAGAGGCATAGGGGACCCACTCAGCCCTGGGTGGGGTGGAATTGATGGCGGCGAGAAATTGGATTTGGAAGATAGTGAGGTTTTGAAAAGGTTTCCGAAAATTCCATCCATGCCCCTTTCCGCTGAGATCGCTGAGACCATTTTATACTCGCTTGGAGGCGCTGTGGTGCCACAGGAATGGAAGAGCACCATAAGGTCCAAGCTCAGAATCAGGAATGTTGGTCCCGGCCCGACCATGCTCAATTTTACATACCAGGGGGAAAAGAAAGTTCGTACCATTCAAAATGTTTTTGCGACCATAAAGGGATTGGAAGAACCTGATCGATATGTTCTGCTTGGGAACCATAGAGATGCATGGACTTATGGGGCTGTTGATCCCAGCAGTGGGACTGCAGCCCTACTAGACATTGCTCGTCGATATTCTCTTCTTTTGCGTTTAGGGTGGACTCCACGTAGGACAATCATCTTGTGTAGTTGGGATGCAGAGGAATTTGGAATGATAGGATCCACAGAGTGGGTTGAACAGAACCTCGCCAATCTGGGTTCCAGAGCTGTAGCGTACCTTAATGTAGACTGTGCTGTTCAAGGGTCTGGTTTCTTTGCTGGTTCAACTCCTCAGCTAGATAATCTCCTTCTTGAGGTCAAGGATCCTGACTCTGAGGATGCAACAATGTATGAGAATTGGGCAGCTACTAATGGAAATTCAAATGTAATGCTTCTGCTACCTGTGCCTATTTGTGAACATATGAAAAATCAAATACCTGCAATTCACTACACTGTACTACATGCTGAGCAAAGTATATACAAATACATGCCCTTCTCTTTTGTGCAGTTAATAGTAAAAATTCAGATTATGAGGCTCAGTGGACTAGATTCTGATTTTGCTCCATTTGTGCAACATGCAGGAGTTCCCTCTATTGATGTGTATTATGGAAGAGaTTTTCCTGTCTATCACACTGCTTTCGACTCCTATAACTGGATGACAGAGTATGGAGATCCATTCTTTAAACGCCATGTGGCTGTTGCTGGAGTTTGGGGACTTCTAGCCCTTCGCCTGGCAGACGATTCCATTCTTCCTTTTAATTACCATCCATATGTAGATCAGTTACAGGAGTACAAGAACATACTGAGCAATTTGTTAGACCAATCAATCTCTCTGGATCCATTAGCTAACTCGATAAAAGAATTTGCTTCAGCTGTCAAAGAAGTTGATGATGAATTAAAGACACTGAGATTACAAGAAACAGCAGGTTGCTTCTTACACACAAAAAGGCGAACATTAAATGATAGACTAATGCTTGCTGAAAAAGGCTTCTTGGATGCAGAAGGACTTCAAGGAAGGAAATGGTTCAAGCATCTTGTGTTTGGGCCTCCAAGAGACCATGCAAGTAAGATGGATTTCTTCCCTGGAATTGCTGATTCTATGGCTTGGTCAACCAAAATGACTGAAAAACAAGCGCAAGCAGCAATTCGACATGAGATCTGGAGGCTTGCCAGAGCCATTCAAAGGGCTGCTTCAGCATTGAGAGGAGAATTCACTTGA 2241 0.4694 MVQFLSKPTTLFAAKPSPLGTFIIILILCILSFRILHYPHHSSSAPAPSTSQNASHFRHIFLSSSSNFTIASYLRALTLHPHLAGTKLASETARYVLNHFRDMGLQAHTVSYTALLSYPLHSSISAHFSDSSFVDLLVTETGRSDVVPPYHAYSPSGSAYAKAVFVNYGRQEDYRALGVLGVNVSGCIVIARKGGGLSRGAVVETAEANGAVAVLTYADGDRFRKGFERGHVMRGIGDPLSPGWGGIDGGEKLDLEDSEVLKRFPKIPSMPLSAEIAETILYSLGGAVVPQEWKSTIRSKLRIRNVGPGPTMLNFTYQGEKKVRTIQNVFATIKGLEEPDRYVLLGNHRDAWTYGAVDPSSGTAALLDIARRYSLLLRLGWTPRRTIILCSWDAEEFGMIGSTEWVEQNLANLGSRAVAYLNVDCAVQGSGFFAGSTPQLDNLLLEVKDPDSEDATMYENWAATNGNSNVMLLLPVPICEHMKNQIPAIHYTVLHAEQSIYKYMPFSFVQLIVKIQIMRLSGLDSDFAPFVQHAGVPSIDVYYGRDFPVYHTAFDSYNWMTEYGDPFFKRHVAVAGVWGLLALRLADDSILPFNYHPYVDQLQEYKNILSNLLDQSISLDPLANSIKEFASAVKEVDDELKTLRLQETAGCFLHTKRRTLNDRLMLAEKGFLDAEGLQGRKWFKHLVFGPPRDHASKMDFFPGIADSMAWSTKMTEKQAQAAIRHEIWRLARAIQRAASALRGEFT 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1179 746 SUPERFAMILY Transferrin receptor-like dimerisation domain 592 744 IPR036757 -
Sto8g1179 746 Coils Coil 626 646 - -
Sto8g1179 746 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 18 744 IPR039373 -
Sto8g1179 746 Pfam Transferrin receptor-like dimerisation domain 617 741 IPR007365 -
Sto8g1179 746 Gene3D - 595 746 IPR036757 -
Sto8g1179 746 Pfam Peptidase family M28 328 429 IPR007484 -
Sto8g1179 746 CDD M28_PSMA_like 325 593 - -
Sto8g1179 746 Gene3D Zn peptidases 70 592 - -
Sto8g1179 746 Gene3D - 122 319 - -
Sto8g1179 746 SUPERFAMILY PA domain 115 330 IPR046450 -
Sto8g1179 746 SUPERFAMILY Zn-dependent exopeptidases 71 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1179 Sto-Chr8 7467875 7472292 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1179 K01301 - gmx:100818733 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1179 8 7467875 7472292 Sto13g2967 13 34599166 34600816 CCT
Sto8g1179 8 7467875 7472292 Sto8g1179 8 7467875 7472292 ECH