Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2967 ATGGCTGAGCATGGAGATCCATTATTTCAGCGTCACGTGGCTGTTACTGGAGTTTGGGGACTTTTAGCCCTTCACCTGGCTGATGATTCCATTCTTCCTTTCAATTACCTTCCATATGCAAATCAGTTACAGGCATACACAAATATACTGAGCAACATGTTAGACCGACGAATCTCTCTTCGTCCATTAAAAATGTCGTTACAGGAGTTTACTTCTGCTGCCAAACAAGCTAACTATGAATCAAAGAAACTGAGATCACGAGATAATGGAGATAGTTTAGTTGATATGAAAAGGCGAGCTCTGAATGATAGACTAATGCTTGCTGAAAAAGGCTTCCTAGATGCCGATGGACTTCAGGGAAGGCAGTGGTTCAAGCATCTTGTGTTTGGGCCTCCCAGTGACCAGGAAAGCAAGCTGGATTTCTTCCCTGGTATTGCTGATGCTATTACTGTGTCAACTAGAATGAATGAAAAAGAAGGGGTGGCGGCAATTCAGCATGAAATCTGGAGGATAGCTAGAGCCATTCAAAGAGCTGCTTCTGCACTGAGAGGAGAATGCACCTAA 564 0.4362 MAEHGDPLFQRHVAVTGVWGLLALHLADDSILPFNYLPYANQLQAYTNILSNMLDRRISLRPLKMSLQEFTSAAKQANYESKKLRSRDNGDSLVDMKRRALNDRLMLAEKGFLDADGLQGRQWFKHLVFGPPSDQESKLDFFPGIADAITVSTRMNEKEGVAAIQHEIWRIARAIQRAASALRGECT 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2967 187 Pfam Transferrin receptor-like dimerisation domain 58 182 IPR007365 -
Sto13g2967 187 PANTHER F10A2.10 PROTEIN-RELATED 1 186 - -
Sto13g2967 187 Gene3D Zn peptidases 1 37 - -
Sto13g2967 187 SUPERFAMILY Transferrin receptor-like dimerisation domain 33 184 IPR036757 -
Sto13g2967 187 Gene3D - 38 187 IPR036757 -
Sto13g2967 187 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 1 186 IPR039373 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2967 Sto-Chr13 34599166 34600816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2967 K01301 - gmx:100817485 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1179 8 7467875 7472292 Sto13g2967 13 34599166 34600816 CCT
Sto13g2967 13 34599166 34600816 Sto13g2967 13 34599166 34600816 ECH