Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1172 ATGGATTCGGAAGCAGTTCCATCTTCTAGAAATTTGGTAAAATGTTGTAACTGCGAGTGTAGTTGCTCGTTGGCAACTGATTCTTCAGGAACTTGGCTTCGTTCTGTTAAACGGAAGCATGGTGAGTTTGAGGGAGATAATAAATTTTCTGTACCCGAGTTGGACACCTTTTCAGTTGCACGGGtccaaattgaaaatgaatGTGAAGCATTACGTGAGATAGTTGCTAGTCAACAACAAGCTATACAAGATCTACATGCTGAACTGGAGGAGGAGAGAAATGCTTCAACAACAGCAGCAAATGAAGCCATGTCTATGATACTAAGATTGCAGAGAGAGAAGGCAGAGATTCAAATGGAAGCTCGGCAGTTCAAGCGTTTTGCAGAGGAGAAGACATCACATGATCAGCAGGAGCTTTTAGCATTGGAAGATATGGTGTATAAGAGAGAGCAGACAATTCAAGCCCTTACATGTGAAGTCCAGGCTTATAAGCACAGGATGATGAGTTATGGCCTCACTGAATCTGAGGCAGAGGGTGAAAGAAACCTAAGCTTGGAGGAATTTGATGATCAATATGAACTTCCCACCTATGATTATCCCCCATTAAAATGTAGTGGACATATTACTATGGATGCTGATAATGATGACACAGATATTGAGAAATATGCATTTGGTGAAACTCCTTGCGATCGATTGAGGAACTTGGAAAATAGAATCTCCCAAATGGAGAGAAATTCCAGTCATAACCAGGTGGATGGGGATTACATGGGAAAAAATATCCTAGAGAAGGTGGTAGTTGGACAGTCTCCAAGGCATACTAGACATTCAAGAAAGTTGTCCAATGACTCAAGTTCATTTGTTGGGATGGGTAGAGAAATGGGTCCTGACTTTCTGATTGATTCTCCCAAGAGCTTTAGGAAGATGGATTATGTCTCACAATCAGAGGAACATTCCAATTTGAGAAAGGTTGATTATGCATCAGAAGCTGCCGACGATATGAGTGACAGAGTTTATACTATTGACTCTGTTCATACTGGGACCCCATACCAGGGACTTCGGGAGTCCAAAGCTGGAGCTGTTAACACAGATTATACTACCACTCCAACAGACTTTGAAGATCCAGACATCAAGAAGCTTTACATGAGACTTCAAGCTCTCGAGGCTGATAGGGAATCAATGAGGCAGGCTATCATATCAATGCGCACTGATAAAGCACAGGTTGTGTTACTGAAGGAAATAGCTCAACATTTGTGCAAAGAGATGTCACCACAAAAGAAAATGACAGTTAGGAAGCCATCTGCTGGCAggttttcatttttgtcaattattaagGTATATGTTTGGGATGCCAGCCAATCGTGTGGGCTTACTAATGCTTCTGGACAAGGGTTCCCATGCAAGGCCACGGAGATGTGTCTCAAGCACACAAGTGGGAGATTATGTATAGAATTTCTGTGGTCCTCTCCTGTACATGACACTGTTGTAAGGTTCCTCCTTACGGACTATGCAGTTCTCTTCTTTTCTCTAGTTCACAACTACTTTGATTGGTGGGCTTCGCCCATTTTCATGTCTGTCTCTGTACTAATTATAGGAACAGAAAGGTTGACCAAGGTATATGGCAAACCCAATTTGCTGTTGCTGTCTGGTCTCAATAATGTGGTAATGGCGGAGCCGTGGAGTATAGACTATAGACTTGCTTCAGTTAAGAACCATAAGAGTTTCATTCAGATGACAAGGGCTAATgattaa 1749 0.4134 MDSEAVPSSRNLVKCCNCECSCSLATDSSGTWLRSVKRKHGEFEGDNKFSVPELDTFSVARVQIENECEALREIVASQQQAIQDLHAELEEERNASTTAANEAMSMILRLQREKAEIQMEARQFKRFAEEKTSHDQQELLALEDMVYKREQTIQALTCEVQAYKHRMMSYGLTESEAEGERNLSLEEFDDQYELPTYDYPPLKCSGHITMDADNDDTDIEKYAFGETPCDRLRNLENRISQMERNSSHNQVDGDYMGKNILEKVVVGQSPRHTRHSRKLSNDSSSFVGMGREMGPDFLIDSPKSFRKMDYVSQSEEHSNLRKVDYASEAADDMSDRVYTIDSVHTGTPYQGLRESKAGAVNTDYTTTPTDFEDPDIKKLYMRLQALEADRESMRQAIISMRTDKAQVVLLKEIAQHLCKEMSPQKKMTVRKPSAGRFSFLSIIKVYVWDASQSCGLTNASGQGFPCKATEMCLKHTSGRLCIEFLWSSPVHDTVVRFLLTDYAVLFFSLVHNYFDWWASPIFMSVSVLIIGTERLTKVYGKPNLLLLSGLNNVVMAEPWSIDYRLASVKNHKSFIQMTRAND 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1172 582 PANTHER BNAANNG28530D PROTEIN 4 446 - -
Sto8g1172 582 Coils Coil 232 252 - -
Sto8g1172 582 Pfam Zein-binding 70 160 IPR007656 -
Sto8g1172 582 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 4 446 - -
Sto8g1172 582 Coils Coil 376 403 - -
Sto8g1172 582 ProSiteProfiles GTD-binding domain profile. 66 164 IPR007656 -
Sto8g1172 582 Coils Coil 61 130 - -
Sto8g1172 582 MobiDBLite consensus disorder prediction 267 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1172 Sto-Chr8 7427242 7430341 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1172 - - aprc:113872114 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1172 8 7427242 7430341 Sto13g2971 13 34629322 34631400 CCT
Sto8g1172 8 7427242 7430341 Sto8g1172 8 7427242 7430341 ECH