Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2971 ATGGATTCAGACGCAGCTCAATTTTCCGGCAAATTGGCAAAATGTTGCAACTGTGGGTGTAGTTGTTCGTTGGCAGCTGAATCTCCAGCGACTTGGATTCGTTCTATTAAACGGAAGCATGATGAGTTTGAAAGGGGTAACCAATTGTTTCTACCTGGTTTGGATCAATTTTCAGTTGCAAGGGTCCAAATTGAGAATGAATGTGCTGCATTGCGCGAGACAGTTAGCAGTCAACAAAAAACTATACAAGATTTATATGCTGAATTGGAGGAGGAGAGAAATGCTTCGTCCACAGCTGCAAATGAGGCTATGTCAATGATATTAAGGTTGCAGAGGGAAAAGGCAGAGATTCAAATGGAAGCCCGGCAATTCAAGACTTTTGCAGAGGAGAAGATGTCACATGATCAGGAGGAAGTTTTAGTATTTGAGGATTTGTTGTATAAGAAAGATCAAACAATTGAGTCACTTACATGTGAAGTGCAGGCTTATAAACATAGGATGATGAGCTATGGGCTCACTGAGTCGGAAGCAGAGGGTGAGAGAGATTTTGATGCTGAATATGAACCTTCCATCTATGAATATCCTCCATTGAAGTGTAATGTAAATGCAATGCATGCTACCGTGGATGCTGATGAAATAGATGTGGAGAAATATGCATTTGGTGAAACCCCTCGTGATCGTTTGAGGAATTTGGAAAGTAGGATATCTCTAATGGAAAGAAGTCCCACTTATAGCCAAGTAGATGGGGATGTTTCAGGGAAAAATATTCTAGAGAAGGTGATAGTTGGGCAATCTCCTAGACGGACCAAACATTCCCAAAAATTTTCAAGTGATTCAAGTTCATTTGTTGCGATGGGTAGAGAGATGAGACCTGAACCATTTATGGATTCACCTAATGCCAGTACTACCACTAGGAAAATAGATAATATCTTACAGTCAGAGGACCCATCCAATTTGAAAAAAGTAGATAATGCATCAGAAGATGGTGATGATTCAGGAGACAGAGTTTATACCATTGACTCTATTCATAATGGGGCTCCATATAATGGGTTCAAAGAGTCTAAACCTGTATCTGGTGTTTATGAAGATTATGCAACCACTCCAAAGGAGTCCTTGAATCATGTTGGATATGAAGACCCCGATATAAAAAAGCTATACATGAGGCTTCAGGCACTTGAGGCTGATAGGGAATCAATGAAGCAGACACTGATTTCAATGAGTACCGATAAAGCACAGATAGTGTTACTAAAGGAAATTGCTCAACATTTGTGCAAAGAGATGTCACCGCAAGGAAAAAAGGTAGTGAGGAAGCCTCCTACTGCTGGAAGATCTTCGTTCTTTTCAGTTTTTAAGtGTGTCTCTGCAATTTTTTCCTGGAGAAAGAAAGCTAGCCAATGCAAGTATACGTTCGGGCAACCAGCCAATGGCGCAGGCTTGCAAATGCTCTTGGAGGACAATGGACCTCGTGTAAGGCAATGGAGATGTATATCGAGCACACAGTTGAGAGTGTAG 1512 0.4107 MDSDAAQFSGKLAKCCNCGCSCSLAAESPATWIRSIKRKHDEFERGNQLFLPGLDQFSVARVQIENECAALRETVSSQQKTIQDLYAELEEERNASSTAANEAMSMILRLQREKAEIQMEARQFKTFAEEKMSHDQEEVLVFEDLLYKKDQTIESLTCEVQAYKHRMMSYGLTESEAEGERDFDAEYEPSIYEYPPLKCNVNAMHATVDADEIDVEKYAFGETPRDRLRNLESRISLMERSPTYSQVDGDVSGKNILEKVIVGQSPRRTKHSQKFSSDSSSFVAMGREMRPEPFMDSPNASTTTRKIDNILQSEDPSNLKKVDNASEDGDDSGDRVYTIDSIHNGAPYNGFKESKPVSGVYEDYATTPKESLNHVGYEDPDIKKLYMRLQALEADRESMKQTLISMSTDKAQIVLLKEIAQHLCKEMSPQGKKVVRKPPTAGRSSFFSVFKCVSAIFSWRKKASQCKYTFGQPANGAGLQMLLEDNGPRVRQWRCISSTQLRV 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2971 503 MobiDBLite consensus disorder prediction 308 333 - -
Sto13g2971 503 ProSiteProfiles GTD-binding domain profile. 66 164 IPR007656 -
Sto13g2971 503 Coils Coil 382 409 - -
Sto13g2971 503 Pfam Zein-binding 70 160 IPR007656 -
Sto13g2971 503 PANTHER BNAANNG28530D PROTEIN 1 477 - -
Sto13g2971 503 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 477 - -
Sto13g2971 503 Coils Coil 61 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2971 Sto-Chr13 34629322 34631400 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2971 - - aprc:113872114 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1172 8 7427242 7430341 Sto13g2971 13 34629322 34631400 CCT
Sto13g2971 13 34629322 34631400 Sto13g2971 13 34629322 34631400 ECH