Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1116 ATGGAAGAAAGTAAATCGAGGTTTAAACGGATTTGTGTGTTCTGTGGGAGCAGTTCAGGCAAGAAGCCTACCTACCAAGATGCCGCTATACAACTTGGGAAGGAGCTGGTGGAGAGAAGAATAGATTTGGTGTACGGAGGTGGTAGCGTGGGGCTCATGGGTCTGGTTTCTCGGGCCGTTCATGATGGAGGCCGCCATGTTCTTGGGGTTATTCCAGTGGGTCTCACGCCAAGAgaggtacatatatatatatatatgaaccctTCCGCAATTCAATTATACTATATTACTATATTCTGTAGTGGGTCCCGAGGCTATGGAACACTTGAGGAATTGCTTGAGGTCATTACATGGGCTCAGCTCGGAATCCACCGCAAACCCGTGGGGCTGTTGAACGTGGATGGTTACTATAATTCCCTTTTGTCCTTCATTGATAAGGCCGTCGATGAAGGCTTTATTTCCTGTACGGCACGTCGCATAATCGTGTCAGCACCCACACCCAAAGATTTAATCAGGGAGTTAGAGGAACATGTACCTGAGCAAGATGAGGTCGTGTCCAAATTGGTGTGGGAAGAGAGACAGCTATACGTGCCTGAATCAGAGGTTGCCGTGtga 615 0.4618 MEESKSRFKRICVFCGSSSGKKPTYQDAAIQLGKELVERRIDLVYGGGSVGLMGLVSRAVHDGGRHVLGVIPVGLTPREVHIYIYMNPSAIQLYYITIFCSGSRGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKAVDEGFISCTARRIIVSAPTPKDLIRELEEHVPEQDEVVSKLVWEERQLYVPESEVAV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1116 204 SUPERFAMILY MCP/YpsA-like 7 177 - -
Sto8g1116 204 Gene3D - 7 193 - -
Sto8g1116 204 PANTHER LOG FAMILY PROTEIN YJL055W 4 80 - -
Sto8g1116 204 PANTHER LOG FAMILY PROTEIN YJL055W 100 201 - -
Sto8g1116 204 TIGRFAM TIGR00730: TIGR00730 family protein 9 176 IPR005269 GO:0009691|GO:0016787
Sto8g1116 204 Pfam Possible lysine decarboxylase 53 173 IPR031100 -
Sto8g1116 204 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG7 4 80 - -
Sto8g1116 204 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG7 100 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1116 Sto-Chr8 7055405 7057639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1116 K22522 - gmx:100788087 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1116 8 7055405 7057639 Sto13g3016 13 34937819 34941311 CCT
Sto8g1116 8 7055405 7057639 Sto8g1116 8 7055405 7057639 ECH