Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3016 ATGGAAGACACCAAATCCAAGTTCAAGCGTATTTGTGTGTTCTGTGGCAGCAGTTCTGGCAAGAAATCTAGCTACCAGGAAGCTGCTATTCAACTTGGCAAGGAACTGGTGGAGAGAAGGATTGATTTGGTCTATGGAGGTGGAAGCGTGGGGTTGATGGGTCTCGTTTCTCAGGCTGTTCATGATGGTGGGCGCCATGTTCTAGGGGTTATCCCCAGAACTCTTATGCCAAAAGAGataACCGGTGATCCCATTGGGGAAGTCAGAGCCGTGTCTGATATGCACCAAAGGAAAGCCGAAATGGCTCGGCAAGCTGATGCCTTCATAGACATCTCAGGAGGATATGGCACTCTTGAGGAATTGCTAGAAGTCATTACTTGGGCTCAGCTGGGAATCCATCGCAAACCCGTGGGGCTGTTGAATGTGGATGGGTACTACAACTCCTTATTGTCGTTCATTGATCAGGCCGTTGATGAAGGCTTTATCTCCCCTACGGCACGTCGCATTATTGTGTCAGCACCCACTGCTAAACAATTGGTCAAAGAGCTAGAAGAACATGTACCCGAGCAAGATGAGGTCGTGTCCAAGTTGGTGTGGGAAGACAGACTAAATTTCGTGCCTGAATCAGAGGTTGCCATGTGA 642 0.4875 MEDTKSKFKRICVFCGSSSGKKSSYQEAAIQLGKELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPRTLMPKEITGDPIGEVRAVSDMHQRKAEMARQADAFIDISGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDQAVDEGFISPTARRIIVSAPTAKQLVKELEEHVPEQDEVVSKLVWEDRLNFVPESEVAM 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3016 213 Pfam Possible lysine decarboxylase 53 182 IPR031100 -
Sto13g3016 213 Gene3D - 1 185 - -
Sto13g3016 213 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG7 4 211 - -
Sto13g3016 213 TIGRFAM TIGR00730: TIGR00730 family protein 9 184 IPR005269 GO:0009691|GO:0016787
Sto13g3016 213 PANTHER LOG FAMILY PROTEIN YJL055W 4 211 - -
Sto13g3016 213 SUPERFAMILY MCP/YpsA-like 7 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3016 Sto-Chr13 34937819 34941311 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3016 K22522 - gmx:100816928 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1116 8 7055405 7057639 Sto13g3016 13 34937819 34941311 CCT
Sto13g3016 13 34937819 34941311 Sto13g3016 13 34937819 34941311 ECH