Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0996 ATGGGGGCCTCACTATCCAGCCTGGGAACAAACGGTTCCACCATTGGTCCGGGCCTCGGGGACATCCCGGAGAGCTGCGTGGCTTGCGTTTTCTTGTATTTGACTCCGCCAGAAATATGCAATTTAGCGCGGCTCAATCGAGCTTTCCGTGGCGCCGCGTCCTCTGATGCCGTCTGGGAAGCTAAGTTGCCCCCTAATTACCAAGATCTGCTCGAGTTAATGCCACCGGAAAGGTATCAGAATTTGTCCAAGAAGGATATATTTGCGCTGCTATCTCGACCAATACCATTTGATGATGGCAATAAGGAAGTATGGCTGGACAGAGTCACAGGCAAGGTTTGCATGTCCATATCAGCAAAAGCGATGTTGATTACTGGAATTGATGACCGGAGATACTGGAATTGGATACCTACTGAAGAGTCTAGCATAGGGTGCATGTGGACTGGTTCGGATTTGGGAATGCTGAACTTGGTTCGTAGGTTTGAACACCGGAAGTTGAGGTTCCATGTTGTGGCATATTTGCAACAAATATGGTGGTTTGAAGTAGACGGGGAGGTAAAATTTCCATTTCCTGCTGATATTTATACTCTCTCCTTCAGGCTTCACCTTGGGAGATTTTCCAAAAGGCTTGGGCGGCGTGTGTGCAGTCATGAACACACGCATGGTTGGGATATAAAGCCAGTTAGTTTTGAGTTGTCAACTTCAGATGGTCAGCAAGCATCGCGTGAGTTCTGTTTGGATGAAACTGAACATGATGATACATATGGTAACCATAAGCGTGGATACTGGGTTGATTACAATGTGGGGGAATTCATTGTAAGTGGAGCAGAACGTAAAACCGAAGTTAGGTTCTCTATGAAACAGATTGATTGTACACACTCCAAAGGTGGGCTTTGTGTAGATTCTGTATTTATTATACCTAGTGATTTGAAAGACCCCAAGAGAAAAGGCGTTTTGAAGTAA 963 0.4579 MGASLSSLGTNGSTIGPGLGDIPESCVACVFLYLTPPEICNLARLNRAFRGAASSDAVWEAKLPPNYQDLLELMPPERYQNLSKKDIFALLSRPIPFDDGNKEVWLDRVTGKVCMSISAKAMLITGIDDRRYWNWIPTEESSIGCMWTGSDLGMLNLVRRFEHRKLRFHVVAYLQQIWWFEVDGEVKFPFPADIYTLSFRLHLGRFSKRLGRRVCSHEHTHGWDIKPVSFELSTSDGQQASREFCLDETEHDDTYGNHKRGYWVDYNVGEFIVSGAERKTEVRFSMKQIDCTHSKGGLCVDSVFIIPSDLKDPKRKGVLK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0996 320 Pfam Phloem protein 2 112 307 IPR025886 -
Sto8g0996 320 SUPERFAMILY F-box domain 17 85 IPR036047 GO:0005515
Sto8g0996 320 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Sto8g0996 320 PANTHER F-BOX PROTEIN PP2-A15 1 142 - -
Sto8g0996 320 PANTHER F-BOX PROTEIN PP2-A15 165 316 - -
Sto8g0996 320 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 165 316 - -
Sto8g0996 320 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0996 Sto-Chr8 6262724 6265835 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0996 - - vra:106772440 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0996 8 6262724 6265835 Sto13g3128 13 35601895 35605225 CCT
Sto8g0996 8 6262724 6265835 Sto8g0996 8 6262724 6265835 ECH