Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3128 ATGGGGGCCTCGCTATCCACCCTCGGAACCAATGCTTCCACTGTGAATCCTGGCCTTGGTGACATCCCGGAGAGCTGCGTCGCTTGCGTTTTTCTCTATTTGACTCCGCCCGAGATTTGCAATTTGGCACGCCTCAATCGGGCCTTTCGTAGTGCCGCCTCCGCTGATTCCGTCTGGGAAACAAAGTTGCCCCCTAATTACAAAGATCTCCTCCATTTTGTGCCTCCCCAAAGTTGCCACAATTTATCAAAGAAGGACATATTTGCGCTACTTTCTCGACCTCTTCCTTTTGATGATGCCAACAAGGTGAGTGCTCTTCACGAAGTATGGCTGGAGAGAGTCACGGGAGGAGTTTGCATGTCCATATCGGCAAAAGCGATGGCGATTACTGGGATCGATGACCGCAGATACTGGAATTGGATTCCTACCGAAGAATCTAGGTTCCATACCGTGGCTTATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTAAAGTTTCCATTGCCGGCTGATATTTATACACTATGCTTCAGGCTTCATCTGGGAAGATTTTCCAAAAGGCTTGGACGGCGAGTGTGCAGCTATGAACACACCCATGGTTGGGATATAAAACCAGTGAGATTTGAGTTGTCAACTTCTGATGGTCAGCAAGCATTGTGTGAATACTGTTTGGATGAAACAGAGCATGATGATGCATATGGCAACCATAAGCGTGGATGCTGGGTAAATTACAAGGTGGGCGAATTTGTTGTCAGTGGATCAGAACCCACAACTGAAGTTAGATTCTCCATGAAACAGATCGATTGTACACATTCAAAAGGTGGACTTTGTGTAGATTCTGTATTTATTATACCTAGTAATTTGAAAGAGCGCAAGAGAAGAAAAGGCATTTTGAAGTAG 906 0.4603 MGASLSTLGTNASTVNPGLGDIPESCVACVFLYLTPPEICNLARLNRAFRSAASADSVWETKLPPNYKDLLHFVPPQSCHNLSKKDIFALLSRPLPFDDANKVSALHEVWLERVTGGVCMSISAKAMAITGIDDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVKFPLPADIYTLCFRLHLGRFSKRLGRRVCSYEHTHGWDIKPVRFELSTSDGQQALCEYCLDETEHDDAYGNHKRGCWVNYKVGEFVVSGSEPTTEVRFSMKQIDCTHSKGGLCVDSVFIIPSNLKERKRRKGILK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3128 301 Pfam Phloem protein 2 118 287 IPR025886 -
Sto13g3128 301 PANTHER F-BOX PROTEIN PP2-A15 1 297 - -
Sto13g3128 301 PANTHER F-BOX PROTEIN PP2-A15 1 297 - -
Sto13g3128 301 Gene3D - 18 61 - -
Sto13g3128 301 SUPERFAMILY F-box domain 16 76 IPR036047 GO:0005515
Sto13g3128 301 SMART fbox_2 22 62 IPR001810 GO:0005515
Sto13g3128 301 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3128 Sto-Chr13 35601895 35605225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3128 - - vra:106772440 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0996 8 6262724 6265835 Sto13g3128 13 35601895 35605225 CCT
Sto13g3128 13 35601895 35605225 Sto13g3128 13 35601895 35605225 ECH