Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0986 ATGCGGTGTTTCCTTTCCTTGTTATTAGCGTTAGCCACCTTCTTGCTACCGATATTGCCAGTATTCAGTGCAGTGCCGGTGAGTTTCCTCCCTCTTGAACGAGCTATTCCTCTTAGCCAGAGAGTGGAACTGGAAGCACTCAGGGCTCGCGACCGTGCTAGGCATGCTCGAATCCTGCAAGGTGTAGTAAGTGGCGTCGTCGACTTCTCAGTCAAAGGGACCTCCGATCCTTCAACTATTGGgCTGTATTATACAAAAGTGAAGCTGGGCTCTCCTCCGAGAGAATTCAACGTCCAGATCGATACTGGAAGTGACATCTTGTGGGTTACTTGCAATACTTGCGGTGATTGCCCTCAATCTAGTCAACTGGCGATTCAACTCAATTTCTTTGATACAGCCAGCTCGTCCACAGCTGCGCTGATTTCCTGCTCAGACCCAATATGTACTTCTTCTACACTGAGTGCGGCTACTGCATGCACTCCTCAGATTAACCAGTGCAGTTACACCTTTCAGTATGGAGATGGAAGTGGGACATCAGGTTATTATGTATCTGACGCAATGTATTTTGACATGATCCTTGGACAGTCTACGTTGGCTAACACTTCTGCTAAAATTGTTTTCGGATGTAGCACCTATCAATCTGGAGATTTGACTAAGACAGATAAAGCAGTGGATGGAATTTTTGGGTTCGGCCCTGGTGCTCTATCTGTTATATCACAGTTGTCATCACGAGGCATAACCCCTAAAGTTTTTTCTCACTGCTTAAAAGGAGAAAGCGATGGAGGAGGCATACTAGTTATTGGTGAAATTTTGGAGCCAAGTATTGTTTACAGTCCACTTGTCCCATCTCAGCCTCATTACAACTTATATCTTCAGAGCATTGCTGTCAATGGGCGACTTCTGCCTATTAATTCAGCTGTATTTGCGACATCTAACAACCGAGGAACTATAGTTGACTCTGGTACAACCTTGGCATACCTTATTCAAGAAGCATATGATCCTCTAGTCAATGCTATAACTACCATTGTGTCACAGTCTGCCACCCCCATTATTTCAAAAGGAAGTCAGTGTTATTTGGTTTCAACCAGTTTAGGTGATATATTTCCTCCAGTCAGTTTGAACTTTGCTGGTGGAGCATCCATGGGTTTAAAACCACAAGAGTACCTTTTGCATAATGGTTTCATTGATGGTGTTGCAATGTGGTGTATTGGTTTCCAGAAAGTACAGGAGGGAGTCACAATTTTAGGAGATCTTGTCCTCAAAGATAAAATTTTTGTCTACGACTTAGCTCATCAGCGAATTGGATGGACTAACTATGATTGTTCCATGTCTGTAAATGTCTCTGTGACTACAAGCAAGGATGAGTTCGTCAATGCAGGACAGTTTAGTGTGCGCAGCTCAGGCTCAGAGGTAGACATTCTCACCGAGTTGCTACCTTTAAGCATTGTGGCTCTCTTTATGCACATAATATTTCTCTGGGGTTtccattttttgtaa 1497 0.4342 MRCFLSLLLALATFLLPILPVFSAVPVSFLPLERAIPLSQRVELEALRARDRARHARILQGVVSGVVDFSVKGTSDPSTIGLYYTKVKLGSPPREFNVQIDTGSDILWVTCNTCGDCPQSSQLAIQLNFFDTASSSTAALISCSDPICTSSTLSAATACTPQINQCSYTFQYGDGSGTSGYYVSDAMYFDMILGQSTLANTSAKIVFGCSTYQSGDLTKTDKAVDGIFGFGPGALSVISQLSSRGITPKVFSHCLKGESDGGGILVIGEILEPSIVYSPLVPSQPHYNLYLQSIAVNGRLLPINSAVFATSNNRGTIVDSGTTLAYLIQEAYDPLVNAITTIVSQSATPIISKGSQCYLVSTSLGDIFPPVSLNFAGGASMGLKPQEYLLHNGFIDGVAMWCIGFQKVQEGVTILGDLVLKDKIFVYDLAHQRIGWTNYDCSMSVNVSVTTSKDEFVNAGQFSVRSSGSEVDILTELLPLSIVALFMHIIFLWGFHFL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0986 498 Pfam Xylanase inhibitor C-terminal 286 437 IPR032799 -
Sto8g0986 498 SUPERFAMILY Acid proteases 81 445 IPR021109 -
Sto8g0986 498 CDD pepsin_A_like_plant 83 441 IPR034161 -
Sto8g0986 498 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Sto8g0986 498 PRINTS Pepsin (A1) aspartic protease family signature 316 327 IPR001461 GO:0004190|GO:0006508
Sto8g0986 498 PRINTS Pepsin (A1) aspartic protease family signature 413 428 IPR001461 GO:0004190|GO:0006508
Sto8g0986 498 Pfam Xylanase inhibitor N-terminal 83 268 IPR032861 -
Sto8g0986 498 Gene3D Acid Proteases 270 448 IPR021109 -
Sto8g0986 498 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 5 460 - -
Sto8g0986 498 Gene3D Acid Proteases 66 269 IPR021109 -
Sto8g0986 498 PANTHER ASPARTYL PROTEASES 5 460 IPR001461 GO:0004190|GO:0006508
Sto8g0986 498 ProSiteProfiles Peptidase family A1 domain profile. 83 437 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0986 Sto-Chr8 6203691 6208430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0986 67 442 Miscellaneous Gene Families AT1G44130 27.342 2.11e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0986 - - gmx:100820394 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0986 8 6203691 6208430 Sto13g3148 13 35710255 35715258 CCT
Sto8g0986 8 6203691 6208430 Sto8g0986 8 6203691 6208430 ECH