Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0937 ATGCAACCAATTGAAGGCACTTGTGACCATTTTGATCTGTCGGCCAAGGTGGCCCCACGCCTAATAACCCCACAATCATACACTCTTTTCTCTGACTTTGGCCTTGTCCTTCACCGAGTGGTAACAACTGACACTATGAAAGAGAGTTATAGTATGGTGAAAAGCACAACACAAATGGGGGCTAATCCAGCAATTGCTTTCAAAGCTCAGACACAAATACCTGATTACCCCGTTGCCATGAATGAGGATAGAAGGCTCACAGGAAGTGGCTTCAAGTCAGTTCGTCCATTTCGATCCGGGTACTTTGGGGCTTCCATTAAGCTCCAACCTGGGTATACTGCGGGAGTTATAACATCTCTCTATCTTTCCAACAATGAAGCTCATCCAGGCTTCCATGATGAAGTGGACATTGAGTTTCTGGGGACGACATTCGGAAAGCCTTACACTTTGCAGACCAACGTTTATATAAGAGGAAGTGGGGATGGTAAAATTATAGGCAGAGAGATGAAATTCCATCTCTGGTTTGATCCTACCAAAGATTTTCATCACTATGCTATACTGTGGAGTCCTAGAGAAATAATATTCTTTGTTGATGATGTGCCCATAAGAAGGTACCCGAGGAAGAGTGATGCAACTTTTCCTTTGAGGCCAATGTGGCTTTATGGATCAATATGGGATGCCTCATCATGGGCAACAGAAGATGGGAAGTACAAAGCTGATTATAGATACCAGCCTTTTGTTGCAAGGTACACCAACTTCAAGGCCAGTGGCTGCTCAGCCTATTCCCCCGCTAGGTGCCACCCTGTCTCAGCCTCGCCGAATAGGTCCGGTAGGCTTAGCAGACAGCAATATAAGGCCATGAGATGGGTACAAAGATACCACATGGTTTACAACTATTGCAGGGATCACAAAAGAGACCACAGACTAACACCAGAGTGCTGGCGTTCAAAGTGA 954 0.4549 MQPIEGTCDHFDLSAKVAPRLITPQSYTLFSDFGLVLHRVVTTDTMKESYSMVKSTTQMGANPAIAFKAQTQIPDYPVAMNEDRRLTGSGFKSVRPFRSGYFGASIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFHLWFDPTKDFHHYAILWSPREIIFFVDDVPIRRYPRKSDATFPLRPMWLYGSIWDASSWATEDGKYKADYRYQPFVARYTNFKASGCSAYSPARCHPVSASPNRSGRLSRQQYKAMRWVQRYHMVYNYCRDHKRDHRLTPECWRSK 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0937 317 Pfam Glycosyl hydrolases family 16 79 242 IPR000757 GO:0004553|GO:0005975
Sto8g0937 317 SUPERFAMILY Concanavalin A-like lectins/glucanases 86 301 IPR013320 -
Sto8g0937 317 PIRSF EndGlu_transf 22 317 IPR016455 GO:0010411|GO:0016762|GO:0042546
Sto8g0937 317 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 87 314 IPR044791 GO:0004553
Sto8g0937 317 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 11 250 IPR000757 GO:0004553|GO:0005975
Sto8g0937 317 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 87 314 - -
Sto8g0937 317 Gene3D - 41 313 - -
Sto8g0937 317 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 277 313 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0937 Sto-Chr8 5901506 5905517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0937 87 313 Glycoside Hydrolase AT3G44990 73.568 3.96e-121 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0937 K08235 - gmx:100796698 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0937 8 5901506 5905517 Sto13g3183 13 35913856 35915002 CCT
Sto8g0937 8 5901506 5905517 Sto8g0937 8 5901506 5905517 ECH