LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto8g0654	ATGGCGGGGAAAGGAGGGAAGGGCCTTCTGGCTGCAAAAACCACAGCTGGTAACAAGGACAAAGATAAGGATAAGGATAAGAAACGGCCTGTTTCCCGATCATCCCGTGCTGGAATTCAGCAAAGGGTCCAAGCGAATGGTCGTGTTGGGGCCACTGCTGCTGTATATTTGGCCTCCATTCTTGAATACCTGACAGCGGAGGTTCTTGAGCTTGCTGGAAATGCAAGCAAAGATCTGAAGCTTGCTATCAGAGGAGATGAGGAGCTTGATACTCTTATTAAAGGCACCATTGCTGGTGGCGGTGTCATCCCTCATATTCACAAGTCCTTGATCAACAAAACCTCCAAAGAATGA	354	0.4831	MAGKGGKGLLAAKTTAGNKDKDKDKDKKRPVSRSSRAGIQQRVQANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE	117

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto8g0654	117	SMART	h2a4	18	117	IPR002119	GO:0000786\|GO:0003677\|GO:0030527
	Sto8g0654	117	Gene3D	Histone, subunit A	17	117	IPR009072	GO:0046982
	Sto8g0654	117	PANTHER	HISTONE H2A	2	115	-	-
	Sto8g0654	117	MobiDBLite	consensus disorder prediction	16	33	-	-
	Sto8g0654	117	MobiDBLite	consensus disorder prediction	1	42	-	-
	Sto8g0654	117	Pfam	C-terminus of histone H2A	87	116	IPR032454	-
	Sto8g0654	117	SUPERFAMILY	Histone-fold	16	94	IPR009072	GO:0046982
	Sto8g0654	117	Pfam	Core histone H2A/H2B/H3/H4	17	80	IPR007125	GO:0003677
	Sto8g0654	117	PRINTS	Histone H2A signature	48	63	IPR002119	GO:0000786\|GO:0003677\|GO:0030527
	Sto8g0654	117	PRINTS	Histone H2A signature	63	76	IPR002119	GO:0000786\|GO:0003677\|GO:0030527
	Sto8g0654	117	PANTHER	HISTONE H2A	2	115	IPR002119	GO:0000786\|GO:0003677\|GO:0030527

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto8g0654	Sto-Chr8	4066632	4067485	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto8g0654	K11251		-	mnt:21395753	174.096

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto8g0654	8	4066632	4067485	Sto13g3477	13	37708514	37709722	CCT