Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3477 ATGGCGGGAAAAGGAGGGAAGGGTCTTCTCGCTGCAAAAACCACAACCGCTAACAAGAAAAGGCCCGTTTCCCGTTCATCCCGTGCTGGAATCCAGTTCCCAGTGGGTCGTATCCACAGACAGCTGAAACAAAGGATTCAAGCAAATGGTCGTGTTGGAGCCACTGCAGCTGTTTATTTGGCCTCTATTCTTGAATATCTGACTGCAGAAGTTCTTGAGCTTGCTGGGAATGCAAGTAAAGATCTGAAGGTGAAGAGGATCACACCTAGGCATTTGCAATTGGCTATCAGAGGAGATGAGGAGCTTGATACTCTGATTAAAGGAACCATTGCTGGTGGTGGCGTCATCCCTCATATTCACAAGTCCTTGATCAACAAAACCTCCAAAGAATGA 393 0.4707 MAGKGGKGLLAAKTTTANKKRPVSRSSRAGIQFPVGRIHRQLKQRIQANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3477 130 CDD H2A 13 126 IPR002119 GO:0000786|GO:0003677|GO:0030527
Sto13g3477 130 PANTHER HISTONE H2A 2 128 - -
Sto13g3477 130 MobiDBLite consensus disorder prediction 1 30 - -
Sto13g3477 130 Gene3D Histone, subunit A 11 130 IPR009072 GO:0046982
Sto13g3477 130 Pfam Core histone H2A/H2B/H3/H4 16 98 IPR007125 GO:0003677
Sto13g3477 130 PRINTS Histone H2A signature 21 43 IPR002119 GO:0000786|GO:0003677|GO:0030527
Sto13g3477 130 PRINTS Histone H2A signature 51 66 IPR002119 GO:0000786|GO:0003677|GO:0030527
Sto13g3477 130 PRINTS Histone H2A signature 66 79 IPR002119 GO:0000786|GO:0003677|GO:0030527
Sto13g3477 130 PRINTS Histone H2A signature 80 94 IPR002119 GO:0000786|GO:0003677|GO:0030527
Sto13g3477 130 PRINTS Histone H2A signature 107 125 IPR002119 GO:0000786|GO:0003677|GO:0030527
Sto13g3477 130 SMART h2a4 10 130 IPR002119 GO:0000786|GO:0003677|GO:0030527
Sto13g3477 130 Pfam C-terminus of histone H2A 100 129 IPR032454 -
Sto13g3477 130 PANTHER HISTONE H2A 2 128 IPR002119 GO:0000786|GO:0003677|GO:0030527
Sto13g3477 130 SUPERFAMILY Histone-fold 17 107 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3477 Sto-Chr13 37708514 37709722 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3477 K11251 - gmx:100782374 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0654 8 4066632 4067485 Sto13g3477 13 37708514 37709722 CCT