Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0606 ATGGAGCTTAGCAAGGTCACGCTCGAGATTTTCTCCAAATTGGAGCATAAATGGCTTTCTCACTGTGAAACCACCAAGAAAACTCGTGTACTTAGCATCGACGGTGGAGGAACCACCGCCATTGTGGCCGGCGCCGCCCTCATCCACCTCGAGGACCAGATCCGTCTTCTCACCGGCGATTCTCACGCCCAAATTGTTGATTTCTTTGACATCGTTGCCGGCACCGGCATTGGCGCCATCCTTGCTGCCATGATCACCGCCGACGACGGCTCCGGCAGGCCTCTCTATACTGCTAGAGACGCCGTTCATCTCATCACTCAAAGGAATTCCGAACTCTACAAGTTTAAGCCCGCCGGAGTTCTTCGCCGGCGCCGGAGATTTTCTTCGAGGAGCATGGATAACGTGTTGAAGCAAGTGTTCCAGAGAAGAGAGGACGGAAATGCAAAGTTGTTAACCTTGAAGGACACGTGTAAACCCCTGCTTATCCCTTGCTTTGACCTCAAGAGTTCGGCGCCGTTCGTGTTTTCCCGAGCCGACGCGTCCGAGTCGCCGAGTTTCAACTTTGAGCTCTGGAAGGTGTGCCGCGCCACTTCAGCCACGCCGAGCCTCTTCAAGCCCTTCCACTTCACTTCCGTGGACGGCAAGACCTCCTGCTCCGCCGTGGACGGCGGTCTCGTGATGAACAACCCCACGGCGGCGGCGGTGACGCACGTGCTACACAACAAGCGTGATTTCCCGTCGGTGAACAGCGTAGAGGATCTTCTGGTACTTTCCTTAGGCAACGGAGCGTCGAGTGGGAAGATAAGTGATAATGGAGAGTGTTCGACATCCACGGTGGTTGACATTGTGGTGGACGGTGTTTCCGAGACGATTGACCAAATGTTGGGTAACGCCTTCAGTTGGAATCGTACGGACTACGTTAGAATTCAGGCCTTGGGTTCGGGAAGGACGAGAGAGGAAGTGCTGAAAGAGAGGGGACTAGAGTCGCTAGCGTTTGGAGGAAAGAGATTACTGAAGGAGAGTAACGGAGAGAGAATCCATAGCTTTGTGCAACGCCTCGTGGCTTCTGGAAAGACCAGCCTACCCCCAAGTCCCTGCAAGGATTCCCCCATTACCCCTCTCATCTCGCTCAGCCTCGCTAGCTAG 1146 0.5462 MELSKVTLEIFSKLEHKWLSHCETTKKTRVLSIDGGGTTAIVAGAALIHLEDQIRLLTGDSHAQIVDFFDIVAGTGIGAILAAMITADDGSGRPLYTARDAVHLITQRNSELYKFKPAGVLRRRRRFSSRSMDNVLKQVFQRREDGNAKLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKVCRATSATPSLFKPFHFTSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNSVEDLLVLSLGNGASSGKISDNGECSTSTVVDIVVDGVSETIDQMLGNAFSWNRTDYVRIQALGSGRTREEVLKERGLESLAFGGKRLLKESNGERIHSFVQRLVASGKTSLPPSPCKDSPITPLISLSLAS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0606 381 PANTHER PATATIN-LIKE PROTEIN 6 2 370 - -
Sto8g0606 381 CDD Pat17_PNPLA8_PNPLA9_like 30 320 - -
Sto8g0606 381 SUPERFAMILY FabD/lysophospholipase-like 26 311 IPR016035 -
Sto8g0606 381 PANTHER PATATIN 2 370 - -
Sto8g0606 381 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 235 IPR002641 GO:0006629
Sto8g0606 381 Pfam Patatin-like phospholipase 31 234 IPR002641 GO:0006629
Sto8g0606 381 Gene3D Cytosolic phospholipase A2 catalytic domain 16 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0606 Sto-Chr8 3704344 3705775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0606 1 374 Acyl Lipid Metabolism Gene Families AT3G63200 72.966 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0606 - - pvy:116130636 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0606 8 3704344 3705775 Sto13g3526 13 37976913 37986700 CCT
Sto8g0606 8 3704344 3705775 Sto8g0606 8 3704344 3705775 ECH