Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3526 ATGGAACTCAGTAAAGTAACGCTGGAGATCTTCTCCAAACTGGAGCACAAATGGCTCTCTCACTGTGAAACCACCCATAAAGCCCGCATTCTCAGCATTGACGGCGGAGGGACTACCGCCATTGTCGCCGGCGCTGCCCTCATTCGTCTCGAGGACCAGATCCGTCTCCAGACACGCCATCCCCACGCCCAAATCACCGATTTCTTCGACATCATTGCCGGCACCGGCATTGGTGCCCTCCTCGCAGCCATGATCACCGCCGCCGATGGCTCCGGTAGGCCTCTCTATACTGCTAGAGACGCTGTGCGCCTCATCACACAGAGGAATTCCGAGCTGTACAAGCAGCTCAAACTCCCCGGAGTTCTGGGCCGGCGCCGGAGATTCTCTTGTCGGAGCATGGAGAAGGTGTTAAAGCAGGTATTCCAGAGAAGAGAGAATGGAGGAGGGCAGTTGACCCTGAAGGACACGTGTAAACCCCTGCTCATTCCTTGCTTTGACCTCAAGAGTGCGGCGCCATTCGTGTTTTCACGTGCGGACGCATCCCAGTCCCTCAGCTTCAACTTCGACCTCTGGAAAGTATGCCGCGCCACCTCAGCTACGCCCAGCCTCTTCAAGCCTTTTCACTTGACCTCGGTGGACGGCAAGACGTCCTGCTCCGCCGTAGACGGCGGACTTGTTATGAACAATCCGACGGCGGCGGCGGTGACTCACGTGCTACACAACAAGCGTGATTTCCCGTGGGTGAAGGGGGTGGGGGATCTGGTGGTGCTATCCTTAGGCAACGGCCCATCCAACGGCGGGAGGAAGGGGGAGACGTTGTCGTCATTGGTTGAGATTGTGATGGATGGGGTGTCGGAAACCATTGACCAAATGTTGGGGAACGCCTTCTGCTGGAACCGTACGGACTATGTGAGACTCCAGGCATTGGGTTTGGGAAGTGGAGAGGAGGTGCTCAAAGAGAAGGGAGTGGAGTCGCTACCCTTTGGCGGCAAGCGGTTACTGAAAGAGACTAACGGACACAGAATCGACAGCTTCGTCCACCcaAGCAAGGGAGAAATGTGTGCAGTAGATATTGATCATGTTCGTAGGAATCACGTGAAGCAACAAGCTGCCACTGCGAAACTTCAATACCCCAATAATAATGAAGCTCATTAG 1155 0.5524 MELSKVTLEIFSKLEHKWLSHCETTHKARILSIDGGGTTAIVAGAALIRLEDQIRLQTRHPHAQITDFFDIIAGTGIGALLAAMITAADGSGRPLYTARDAVRLITQRNSELYKQLKLPGVLGRRRRFSCRSMEKVLKQVFQRRENGGGQLTLKDTCKPLLIPCFDLKSAAPFVFSRADASQSLSFNFDLWKVCRATSATPSLFKPFHLTSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPWVKGVGDLVVLSLGNGPSNGGRKGETLSSLVEIVMDGVSETIDQMLGNAFCWNRTDYVRLQALGLGSGEEVLKEKGVESLPFGGKRLLKETNGHRIDSFVHPSKGEMCAVDIDHVRRNHVKQQAATAKLQYPNNNEAH 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3526 384 CDD Pat17_PNPLA8_PNPLA9_like 30 308 - -
Sto13g3526 384 Gene3D Cytosolic phospholipase A2 catalytic domain 16 370 - -
Sto13g3526 384 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 235 IPR002641 GO:0006629
Sto13g3526 384 Pfam Patatin-like phospholipase 31 234 IPR002641 GO:0006629
Sto13g3526 384 PANTHER PATATIN-LIKE PROTEIN 6 1 347 - -
Sto13g3526 384 PANTHER INACTIVE PATATIN-LIKE PROTEIN 9-RELATED 1 347 - -
Sto13g3526 384 SUPERFAMILY FabD/lysophospholipase-like 27 309 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3526 Sto-Chr13 37976913 37986700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3526 1 347 Acyl Lipid Metabolism Gene Families AT3G63200 68.156 1.15e-179 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3526 - - gmx:100777557 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0606 8 3704344 3705775 Sto13g3526 13 37976913 37986700 CCT
Sto13g3526 13 37976913 37986700 Sto13g3526 13 37976913 37986700 ECH