Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0563 ATGCCGATGGCGCCTGTCCCTGCATCGCCGGCCATCGATCGTGTTCCTCCGGTGGGGCCGACAATGCTGCCGATGCGATCGTCGCCTATGATGGTCCCTGACTCCTTCGCCAAAGACGCCATCCTTTCCTGGTTCCGCGGCGAGTTTGCGGCGTCCAACGCAATCATCGACGCCCTCTGCGGCCACCTGACTCAGCTCGCCTCCGCCGCCGGCAGCTCTGACTACGACTCGGTCTTCGCTGCAATTCATCGCCGGAGACTGAATTGGATCCCGGTGATCCAGATGCAGAAGTATCACTCCATAGCCGACGTGGCCTTGGAGCTCCGAAAAGTGGCGGAGAGAAAGACAGAGGTGAAGGAATTGAGTGAAGGAGAGAAGAGGAGTGAGGATTCCAAGAGTACTTTGGACGAGAAGGAGAAAATTGAAGAGAAAGTGATCGAAAGTAATGGAAATATTGGCAGCGACGAAGGTGTCGAAGAGTATGATTCACCTGATAGTGAAATTACTGATTCAGGTCAATATCGCTGTATTTGGTGTGTAGGAAGTCAGGAAATGCAGGGGAGTTTGATGGACATATGTTCCAACCATGAAGTATGTGAAGGACGTCCGTCCCAAATAAAGTTGAGAAATGGTTTTAAAGCAAAGGAGCCAGTGAAGGGGCATATGGTGAATGTTGTGAAGGGATTGAAACTACACGAGGACATTTTCACTGATTCTGAGCTCTGCAAGCTTACAGATTTTGTCCATGAGATTCATGCTGCTGGTCGGAATGGGGAACTCTCCGGTGAAACTTTTATACTATTTAACAAACAGATGAAGGGGAACAAACGAGAGATGATTCAGCTGGGTGTACCAATTTTTGGACAGATAAAGGAGGAtgcaaaaaGCAATATAGAGCCAATTCCATCTCTTCTCCAAAGTGTCATTGATCACCTTATTCAATGGCAATTAATTCCCGAGTACAGAAGGCCAAACGGTTGTATCATCAACTTTTTTGAAGAGggGGATTATTCTCAGCCATTCCTGAAACCACCGCACCTGGACCAACCTCTGTccactctctttctctctgaaTCAACTATGGCTTTTGGGCGTGTCCTGATGAGCGAAAATGATGGGAACTACAAAGGGTCACTGATGCTCTCATTGCAAAAGGGGTCTCTCTTGGTGATGAGAGGAAACAGTGCTGACATTGCGAGGCATGTAATGTGTCCATCGCCAAACAGAAGGATCAGCATCACCTTCTTCAGAGTGAGACCAGACTCCAATCAATGCCAATCACCAACTCCTGCAATGACAAGTGCAATGACTCTTTGGCAACCTGGAATTTCTAGTTCATACGCTTTGTCAAATGGAGCTCTCAGTGGGCATGAAGCAATGGAAATGATGCCCAAATGGGGAATTCTTCGTGCTCCAATGGTGATGCTAGCCCCTGTAAGCCCTATGGTATTGAACCCCCGAAAACTTCCTCGTGGGGGAACTGGGGTTTTCTTGCCTTGGAATGTGCCTTCCAGAAAACCTGCAAAGCATCTTCCACCACGAGCTCAAAGAGGGCGGTTTCTGGCATTACCTCCCCCAGTTGAATCACACATGGCCGAGTCTTCTTCAGAAGGAGCAAATATTTAG 1626 0.476 MPMAPVPASPAIDRVPPVGPTMLPMRSSPMMVPDSFAKDAILSWFRGEFAASNAIIDALCGHLTQLASAAGSSDYDSVFAAIHRRRLNWIPVIQMQKYHSIADVALELRKVAERKTEVKELSEGEKRSEDSKSTLDEKEKIEEKVIESNGNIGSDEGVEEYDSPDSEITDSGQYRCIWCVGSQEMQGSLMDICSNHEVCEGRPSQIKLRNGFKAKEPVKGHMVNVVKGLKLHEDIFTDSELCKLTDFVHEIHAAGRNGELSGETFILFNKQMKGNKREMIQLGVPIFGQIKEDAKSNIEPIPSLLQSVIDHLIQWQLIPEYRRPNGCIINFFEEGDYSQPFLKPPHLDQPLSTLFLSESTMAFGRVLMSENDGNYKGSLMLSLQKGSLLVMRGNSADIARHVMCPSPNRRISITFFRVRPDSNQCQSPTPAMTSAMTLWQPGISSSYALSNGALSGHEAMEMMPKWGILRAPMVMLAPVSPMVLNPRKLPRGGTGVFLPWNVPSRKPAKHLPPRAQRGRFLALPPPVESHMAESSSEGANI 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0563 541 MobiDBLite consensus disorder prediction 117 168 - -
Sto8g0563 541 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 23 536 - -
Sto8g0563 541 MobiDBLite consensus disorder prediction 117 146 - -
Sto8g0563 541 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 323 420 IPR005123 -
Sto8g0563 541 SUPERFAMILY Clavaminate synthase-like 221 419 - -
Sto8g0563 541 Gene3D - 212 427 IPR037151 -
Sto8g0563 541 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 23 536 IPR044842 GO:0003729|GO:0006402|GO:0032451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0563 Sto-Chr8 3449367 3453934 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0563 K10767 - qsu:111992633 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0563 8 3449367 3453934 Sto13g3557 13 38172876 38175633 CCT
Sto8g0563 8 3449367 3453934 Sto8g0563 8 3449367 3453934 ECH