Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3557 ATGGCGGCTGGGCCAGCATCGCCGACTGATCCTACCCCTCCGGTGGGGCCAACTATGGTGCCGATGCAATCAACGCCGGTGATGGTATCCGACTCATTCGCCAAGGACGCCATTATTTCTTGGTTCCGCGGCGAGTTTGCTGCCGCGAACGCCATTATCGATGCTCTCTGTGGTCATCTGGCTCAGCTCAGCGGCGGCGCAGGAGGCTCTGACTACGACTCGGCCTTCGCCGCAATTCATCGGCGGAGACTGAACTGGATCCCTGTGATACAGATGCAGAAGTATCACTCGATAGCCGAAGTGGCTGTGGAGCTTCGCAAAGTCGCGGAGAAGAAAACAGAGGCCAAGGAAAAGACGGAAGGTGAGAGAAAGAATGAGGTCGTGAACGCTTGTTTGGATGAGAAGCAGAAAATCAACGAGAAAGTTATGGAAAGTAATGAAAATGGCGGTGACGAGGCTGTTGAAGAGTATGATTCGCCAGAGAGTGAAATTACAGATTCAGGATCTCAAGAACTGCAAGGCAGTCTGATGAACAGTAGTATATGTTGGAACCACGAAGAATGTGAAGGTCGTTTTCCCCAGATAAAGTCCAGAAAAGGTTTCTCAGCAAAGGAGTCGGTGAAGGGTCACATGGTGAATGTAGTCAAAGGATTAAAGTTATATGACGACGTTTTCAATGAGTCAGAACTCCGCAAGCTTTTTGATTTTGTCAATGACATCCATTCTGCTGGCCAGAATGGAGAACTCTCGGGCGAAACATTTATACTATTCAACAAGCAGATGAAGGGCAACAAGAGAGAGCTGATCCAGCTAGGTGTTCCAATATTTGGACAGATCAAGGAGGACGCAAAAACCAATATAGAGCCCATTCCAGCTCTGCTTCAGAGTGTCATTGATCATCTTATTCAATGGAAATTACTTCCAGAGTACAAAAGGCCAAATAGTTGCATCATCAACTTCTTTGAAGAGGGGGAATATTCTCAGCCATTCCTGAAACCACCCCATCTGGATCAACCAGTTTCCACTCTTCTTTTGTCTGAATCAACTATGGCTTTTGGGCGAACCCTTATGAGCGACAATGAAGGAAACTACAAGGGACCACTCATGCTCTCTTTGAAGAATGGGTATATATTAAAGAACTTATAA 1146 0.4686 MAAGPASPTDPTPPVGPTMVPMQSTPVMVSDSFAKDAIISWFRGEFAAANAIIDALCGHLAQLSGGAGGSDYDSAFAAIHRRRLNWIPVIQMQKYHSIAEVAVELRKVAEKKTEAKEKTEGERKNEVVNACLDEKQKINEKVMESNENGGDEAVEEYDSPESEITDSGSQELQGSLMNSSICWNHEECEGRFPQIKSRKGFSAKESVKGHMVNVVKGLKLYDDVFNESELRKLFDFVNDIHSAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKEDAKTNIEPIPALLQSVIDHLIQWKLLPEYKRPNSCIINFFEEGEYSQPFLKPPHLDQPVSTLLLSESTMAFGRTLMSDNEGNYKGPLMLSLKNGYILKNL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3557 381 Gene3D - 201 379 IPR037151 -
Sto13g3557 381 MobiDBLite consensus disorder prediction 142 170 - -
Sto13g3557 381 MobiDBLite consensus disorder prediction 1 20 - -
Sto13g3557 381 Coils Coil 98 118 - -
Sto13g3557 381 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 20 378 - -
Sto13g3557 381 SUPERFAMILY Clavaminate synthase-like 207 367 - -
Sto13g3557 381 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 20 378 IPR044842 GO:0003729|GO:0006402|GO:0032451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3557 Sto-Chr13 38172876 38175633 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3557 K10767 - gmx:100796344 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0563 8 3449367 3453934 Sto13g3557 13 38172876 38175633 CCT
Sto13g3557 13 38172876 38175633 Sto13g3557 13 38172876 38175633 ECH