Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0552 ATGGCGAAGCCAAGGGAGTCTGGGACTGCCATTGCTTCCTATGTGCTGCTTTTCGTGTGTTTGATACAGATGCAATGTGATTTCCCTGTGTTTGCAATGTTGGACCCTCTTGATTTCTTGGCTCTTCAATCGGTTCGCAAGGCTCTCCAGGATATGCCCGGATCCAATTTCTTTGATTCTTGGGATTTCACTTCTGATCCTTGTAATTTCGCCGGTGTTTACTGTGATTCCGATAAGGTCGTCGCTCTCAATCTTGGTGATCCCAGAGCCGGTTCCCCCGGTCTAACTGGCCGGCTTGATCCGGCAATCGGTAAGCTCACTGCTCTCGCCGAGTTCACGGTTGTGTCGGGTAGAATCTACGGTTCTCTGCCCCAGTCATTGACTAATTTGAAGAACCTCAGGTTCCTCGGCGTCAGCCGGAACTTcatttccggcgagattccggcgcaCTTGGGCCGCTTGCGCAATCTCAGAACCCTCGATCTTAGCTACAATCAACTTACCGGCCACATTCCTCCATCCATCGGAGCCTTACCGGAGCTAAACAACCTGATCCTCTGCCACAACCACCTCTCCGGTTCGGTCCCCTCCTTTGCGTCTCCGACGCTAACTAGGCTGGACCTGAAGCACAATACTCTCACCGGTTCGCTCGCTCCCAATTCTCTCCCTCCTTCTCTCCAATACCTCTCTCTGTCGTGGAACAATCTCACCGGCCCTGTGGACCGGCTCTTGAACCGGATGAACCAGTTGAACTACCTGGACCTCAGCTTGAACCAGTTCACAGGCAACATTCCTGCTCGTATCTTCTCATTTCCACTCACGAATCTTCAACTGGAAAGGAACCAGTTTTCCGGTCCGGTCCAACCGCTTGATCAAGTCTCAATCCCAACCGTGGATCTTAGCCACAACAGTTTTTCGGGGCAAATTTCACCCTTGTTTTCGACCGTAGAGAATCTATACCTGAACAACAACCGGTTCACGGGTCGGGTCCCGAGCAACTTCGTGGACCGGCTATTGGCGGCTAGGATCCAGATACTATATCTACAGCACAACTATCTTACGGGCATTGAGATTAGTCCAACGGCTGAGATTCCCGTAAGCAGCTCGCTGTGTCTACAGTATAACTGCATGGTCCCGCCCATACAGACGCCCTGCCCCTTCAGGTCCGGGAAACAGATAACGAGGCCTACTGCACAATGCAACGAGTGGAGGGGGTAA 1218 0.5107 MAKPRESGTAIASYVLLFVCLIQMQCDFPVFAMLDPLDFLALQSVRKALQDMPGSNFFDSWDFTSDPCNFAGVYCDSDKVVALNLGDPRAGSPGLTGRLDPAIGKLTALAEFTVVSGRIYGSLPQSLTNLKNLRFLGVSRNFISGEIPAHLGRLRNLRTLDLSYNQLTGHIPPSIGALPELNNLILCHNHLSGSVPSFASPTLTRLDLKHNTLTGSLAPNSLPPSLQYLSLSWNNLTGPVDRLLNRMNQLNYLDLSLNQFTGNIPARIFSFPLTNLQLERNQFSGPVQPLDQVSIPTVDLSHNSFSGQISPLFSTVENLYLNNNRFTGRVPSNFVDRLLAARIQILYLQHNYLTGIEISPTAEIPVSSSLCLQYNCMVPPIQTPCPFRSGKQITRPTAQCNEWRG 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0552 405 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Sto8g0552 405 Gene3D Ribonuclease Inhibitor 200 384 IPR032675 -
Sto8g0552 405 Pfam Leucine Rich repeat 224 238 IPR001611 GO:0005515
Sto8g0552 405 Pfam Leucine Rich repeat 200 215 IPR001611 GO:0005515
Sto8g0552 405 Pfam Leucine Rich Repeat 156 178 IPR001611 GO:0005515
Sto8g0552 405 Gene3D Ribonuclease Inhibitor 38 199 IPR032675 -
Sto8g0552 405 SMART LRR_typ_2 247 271 IPR003591 -
Sto8g0552 405 SMART LRR_typ_2 154 178 IPR003591 -
Sto8g0552 405 SUPERFAMILY L domain-like 44 381 - -
Sto8g0552 405 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 10 401 - -
Sto8g0552 405 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Sto8g0552 405 PANTHER LRR RECEPTOR-LIKE KINASE 10 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0552 Sto-Chr8 3394039 3395256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0552 41 355 Receptor kinase-like Gene Family AT5G62230 33.133 4.76e-41 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0552 - - mnt:21403319 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0552 8 3394039 3395256 Sto13g3568 13 38234401 38235609 CCT
Sto8g0552 8 3394039 3395256 Sto8g0552 8 3394039 3395256 ECH