Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3568 ATGGCGAATCAAAGGCTATCAATATCATCATACATTTTTCTTATCATTTGTTTGATACACATACTATCTCATTTGCGTGCGCGTGCCATGTTGGACCCTGTTGATTTCTTGGCTCTGCAATCTATTCGCAAGGCTCTCGATGATATGCCAGGATCCAATTTCCTTTCTTCTTGGGATTTCACTTCCGACCCATGTAATTTCGCCGGCGTTTACTGTGATTCCGATAGGGTTATTGCCCTCAATCTGGGCGATCCCAGAGCCGGTGCTCCCGGTCTAACCGGAAAACTCGACCAGGCCATCGGTAAGCTCTCTGCTCTCGCCGAGCTCACCGTGGTTCCGGGTAGGATGTACGGTCCTCTCCCCCAGTCATTGTCTAACTTGAAGAACCTCAGGTTCCTCGGCATCAGCAAGAACTTCatctccggcgagattccggcgacgTTGGGTCAGTTGCACAATCTGAGAACCCTGGACCTCAGCTACAATCAACTTACGGGAGCCATCCCTCCGTCCATCGGAGCCTTACCGGGGCTAAACAATGTCATCCTCTGCCACAACCGCCTCTCCGGTACTGTCCCCTCATTTGCATCACAGACCCTAACCCGGCTCGACCTGAAACACAATGCTTTGTCCGGTTCGCTGGCTCCAAATtctctccctccctctctcCAATATCTATCTCTATCATGGAATAAGCTAAGTGGGCCAGTGGATCGGCTGTTGAACCGGATGGACCGATTGAACTATCTGGATCTTAGCCTGAACCAGTTCTCGGGCATGATTCCGGGTCGGATCTTCTCATTTCCACTGGCCAATCTGCAATTAGAAAGGAATGCATTCTCGGGTGTAGTACAGCCCTTTGATCAGGTGAAAATCCCGACCGTTGATCTGAGCTACAACAGATTGTCGGGTCAAGTATCGCCCATGTTCGCGAGTGTACAGAATCTGTACCTCAACAACAATCGGTTCACGGGTCAGATTCCGAGTAGCTTCGTGGATCGGTTATTGGATGCTACCATACAGATACTATACTTACAGCACAATTATCTCACAGGGATTGCGATCAGTCCGACGGCTGAGATTCCTCTAAGCAGCTCATTGTGTCTACAGTATAATTGCATGGTCCCACCCATAGAGACCACTTGCCCTTCCAAGGCTGGGAAGCAGATAACTAGGCCTGCTGCGCAATGCGGCCATTGGAGGGGGTAA 1209 0.4822 MANQRLSISSYIFLIICLIHILSHLRARAMLDPVDFLALQSIRKALDDMPGSNFLSSWDFTSDPCNFAGVYCDSDRVIALNLGDPRAGAPGLTGKLDQAIGKLSALAELTVVPGRMYGPLPQSLSNLKNLRFLGISKNFISGEIPATLGQLHNLRTLDLSYNQLTGAIPPSIGALPGLNNVILCHNRLSGTVPSFASQTLTRLDLKHNALSGSLAPNSLPPSLQYLSLSWNKLSGPVDRLLNRMDRLNYLDLSLNQFSGMIPGRIFSFPLANLQLERNAFSGVVQPFDQVKIPTVDLSYNRLSGQVSPMFASVQNLYLNNNRFTGQIPSSFVDRLLDATIQILYLQHNYLTGIAISPTAEIPLSSSLCLQYNCMVPPIETTCPSKAGKQITRPAAQCGHWRG 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3568 402 PANTHER LRR RECEPTOR-LIKE KINASE 8 398 - -
Sto13g3568 402 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 8 398 - -
Sto13g3568 402 Pfam Leucine Rich repeat 197 212 IPR001611 GO:0005515
Sto13g3568 402 ProSiteProfiles Leucine-rich repeat profile. 153 175 IPR001611 GO:0005515
Sto13g3568 402 SUPERFAMILY L domain-like 37 378 - -
Sto13g3568 402 Pfam Leucine Rich Repeat 153 175 IPR001611 GO:0005515
Sto13g3568 402 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Sto13g3568 402 Gene3D Ribonuclease Inhibitor 198 385 IPR032675 -
Sto13g3568 402 Gene3D Ribonuclease Inhibitor 35 197 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3568 Sto-Chr13 38234401 38235609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3568 34 378 Receptor kinase-like Gene Family AT3G51740 35.230 3.55e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3568 - - jcu:105650059 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0552 8 3394039 3395256 Sto13g3568 13 38234401 38235609 CCT
Sto13g3568 13 38234401 38235609 Sto13g3568 13 38234401 38235609 ECH