Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0535 ATGACGGGGCTAGTGATGGTGACCAAGGGCGGAGGGAAGGGAGCCAAGGGAGGAAgagccgccgccgccgccgccgccgaggAAGAGCAGAATCAGCTGTCGCTCGTGGCATTTCTATTGGCTGCCTTGAGAAAGTCCATGGTAGCTTGTCGGGTGGATCGACCCGACGATGTCATCTCCACCGTTCATCACATGGAAATCGGATGGCCCACGAACGTTCAGCACATCACTCATGTCACTTTCGACCGCTTCAATGGCTTCCTCGGTCTTCCCGTTGAGTTCGAGGTCGAGATCCCCGGTCGTGTTCCCAGTGCCAGTGTAAGTGTGTTTGGCGTCTCAGCAGAATCAATGCAGTGTTCTTATGATTCCAAAGGAAATAGTGTCCCCACTATTCTGTTGCTAATGCAGGAGCGTTTGTACACACAGGGAGGCCTAAAGCGTGAAGGAATATTTCGCATAAACCCGGAAAACAGTCAAGAGGAGCATGTGAGAGACCAGTTGAATAGGGGGATTGTGCCAAATGACATTGATGTCCACTGCTTGGCTGGCCTAATTAAAGCCTGGTTCAGAGAGCTTCCTTCAGGAGTGCTAGATGGACTCTCCCCTGAACAAGTTCTTCAATGCAACACTGAGGAAGAATCTGTTGAGCTTGTGAAGCAGTTAAAACCAACTGAATCTGCTTTGCTCAACTGGGCCATTGATCTCATGGCTGATGTTGTAGAGGAGGAGGAATACAACAAAATGAATGCAAGAAATATTGCAATGGTTTTTGCTCCAAACATGACTCAGATGTCTGATCCATTAACGGCTTTGATGCACGCGGTCCAAGTGATGAACTTACTCAAGACCTTAATAATGAAGACTCTTAGAGAGCGGGAAGAGACAACAACAGGAGGATATTCACCCATGTCATTTCGTTCATCAGATCGCCAATCTGAGGATGGATATGACAGTCAGCAAGAAATGGAGACCAGTGGTGAATTGAGAGGGAATAGCCATAGCAGTGAAGAGGAAGGTGGGGCCGAATCATTGAGTGAGATAGAGGAATGCTTCCTGAAGCAATTGGATGAAAACACCCAAGTATGCTCAGAAGAACCTGCAGATAGCAAAACTGGGATTTCCATTTCCTGCTCGAGTTCCACGCATGGCGAAAAGTCAAAGACAGCCCAGACCGCTGCCGGATCAAATGTTGACGACACAAGTAGTCCATCAATAGGATGTACAGCCACAGGCAGTGATGATGTGGAGATGATGGATAAATTTAAAGATTCTGTTTCACCAGTACCACTGTTTTCATCCAATTAG 1305 0.4621 MTGLVMVTKGGGKGAKGGRAAAAAAAEEEQNQLSLVAFLLAALRKSMVACRVDRPDDVISTVHHMEIGWPTNVQHITHVTFDRFNGFLGLPVEFEVEIPGRVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYTQGGLKREGIFRINPENSQEEHVRDQLNRGIVPNDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESVELVKQLKPTESALLNWAIDLMADVVEEEEYNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREETTTGGYSPMSFRSSDRQSEDGYDSQQEMETSGELRGNSHSSEEEGGAESLSEIEECFLKQLDENTQVCSEEPADSKTGISISCSSSTHGEKSKTAQTAAGSNVDDTSSPSIGCTATGSDDVEMMDKFKDSVSPVPLFSSN 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0535 434 CDD RhoGAP 129 285 - -
Sto8g0535 434 Gene3D CRIB domain 62 98 IPR036936 -
Sto8g0535 434 MobiDBLite consensus disorder prediction 295 309 - -
Sto8g0535 434 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 405 - -
Sto8g0535 434 Pfam P21-Rho-binding domain 66 95 IPR000095 -
Sto8g0535 434 ProSiteProfiles Rho GTPase-activating proteins domain profile. 112 293 IPR000198 GO:0007165
Sto8g0535 434 Gene3D Rho GTPase activation protein 99 293 IPR008936 GO:0007165
Sto8g0535 434 ProSiteProfiles CRIB domain profile. 67 80 IPR000095 -
Sto8g0535 434 SMART PBD_5 67 101 IPR000095 -
Sto8g0535 434 SMART RhoGAP_3 126 289 IPR000198 GO:0007165
Sto8g0535 434 SUPERFAMILY GTPase activation domain, GAP 108 286 IPR008936 GO:0007165
Sto8g0535 434 Pfam RhoGAP domain 129 263 IPR000198 GO:0007165
Sto8g0535 434 MobiDBLite consensus disorder prediction 362 412 - -
Sto8g0535 434 MobiDBLite consensus disorder prediction 293 344 - -
Sto8g0535 434 PANTHER MKIAA1688 PROTEIN 1 405 IPR044785 GO:0005096
Sto8g0535 434 MobiDBLite consensus disorder prediction 362 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0535 Sto-Chr8 3300249 3302317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0535 - - gmx:100807134 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0535 8 3300249 3302317 Sto13g3575 13 38270835 38272180 CCT
Sto8g0535 8 3300249 3302317 Sto8g0535 8 3300249 3302317 ECH