Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3575 ATGGCGAGGGGAAGCAGAGAAGGTAAGAAGAGGCAAGCAGAGAAAGACAACAAGTGCATTGTTCCATTGATATTGGGGGCTTTGAGAAAATCCATGGTGTCGTGCCGGGTGGACGCTCCCATGGAAACCGGATGGCCCACCGACGTTCACCACATCACTCACGTCACTTTCGATCGCTTCCATGGCTTTCTCGGTCTCCCCCCTGACCTTCAGCTTCACATCCCCCCTCGCGTTCCCAGCGCTAGCAAAAGTGTGTTCGGCGTCTCAGTGGAATCAATGCAATGTTCCTATGATTCAAAAGGGAATAGTATCCCAACTATTCTGTTGCTAATGCAGCAGCGTTTATACTCGCAGGGAGGCCTAAAGGCAGAAGGAATATTTCGCATAAACCCAGAAAACGGTGAAGAGGAGAATTTGAGAGAGCAGTTGAATAGGGGGATTGTGGGAGAAGAGATGGAGGTGCATTGTTTGGCAGGCCTAATTAAAGCCTGGTTCCGAGAGCTTCCTTCAGGAATTCTAGATGGGCTTTCTCCACAGCAAGTTCTTGAGTGCAACACGGAGGAAGAATACATGGAGCTGGTGAAGCAACTTGAGCCCACCCAATCCGCCCTCCTGCAGTGGGCCGTGGATCTCATGGCGGACGTTGTTCAACACCAACATCACAACAAAATGAACTCTAGAAATATTGCCATGGTTTTTGCCCCAAACATGACTCAGATGTCGGATCCACTAACAGCTCTGATGCATGCGGTCCAAGTGATGAACTTACTCAACACCCTCATTACCAACACACTCACACAGCGTGAACAAGAAACGGCAGCAGCAGGGTGTTCCCCCGCGTCGTTTCATTCATACGAGAGTGAAGAAATGAATGGTAGCGGTAGCGGAGAAGAGGACCACCAAACCCTATCTAATTTATGTCACATTGAGCTCGAGGAATTCTCCGTACACGATGCTATCATCTTTACTGATACTACATCTACATCTGCCAATTCCTGCTCCACTTCCCCTTTTGAACAACACACAATTCTTTCTGCCTTCCCATCAATTCATGATACAACCACTCCATCCATGCAATTTACATCTTATTAA 1092 0.4817 MARGSREGKKRQAEKDNKCIVPLILGALRKSMVSCRVDAPMETGWPTDVHHITHVTFDRFHGFLGLPPDLQLHIPPRVPSASKSVFGVSVESMQCSYDSKGNSIPTILLLMQQRLYSQGGLKAEGIFRINPENGEEENLREQLNRGIVGEEMEVHCLAGLIKAWFRELPSGILDGLSPQQVLECNTEEEYMELVKQLEPTQSALLQWAVDLMADVVQHQHHNKMNSRNIAMVFAPNMTQMSDPLTALMHAVQVMNLLNTLITNTLTQREQETAAAGCSPASFHSYESEEMNGSGSGEEDHQTLSNLCHIELEEFSVHDAIIFTDTTSTSANSCSTSPFEQHTILSAFPSIHDTTTPSMQFTSY 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3575 363 Gene3D Rho GTPase activation protein 73 271 IPR008936 GO:0007165
Sto13g3575 363 SUPERFAMILY GTPase activation domain, GAP 82 264 IPR008936 GO:0007165
Sto13g3575 363 CDD CRIB 41 71 - -
Sto13g3575 363 Pfam RhoGAP domain 105 239 IPR000198 GO:0007165
Sto13g3575 363 PANTHER MKIAA1688 PROTEIN 8 316 IPR044785 GO:0005096
Sto13g3575 363 PANTHER RHO GTPASE-ACTIVATING PROTEIN GACA 8 316 - -
Sto13g3575 363 SMART RhoGAP_3 102 265 IPR000198 GO:0007165
Sto13g3575 363 ProSiteProfiles Rho GTPase-activating proteins domain profile. 88 268 IPR000198 GO:0007165
Sto13g3575 363 CDD RhoGAP 105 263 - -
Sto13g3575 363 SMART PBD_5 43 77 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3575 Sto-Chr13 38270835 38272180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3575 - - gmx:100807134 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0535 8 3300249 3302317 Sto13g3575 13 38270835 38272180 CCT
Sto13g3575 13 38270835 38272180 Sto13g3575 13 38270835 38272180 ECH