Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0465 ATGACATGGAGGAGGGACTCTGGTCTCTCAGATGGCTCTGCCATGCATGTTGATTTGGTTGGAGGGTATTACGATGCAGGGGACAATGTCAAGTTCGGTTTTCCCATGGCATTCACCGCCACCATGCTTTCCTGGAGCGTTATTGAGTTTGGTGGCCTTATGGGAGGTGAATTGCAGAATGCTAGAGAGGCCATTCGTTGGGCCACCGATTATCTTCTCAAAGCCACTGTACATCCGGACACTATCTACGTTCAGGTGGGAGATGCTAAGAAGGACCATGCTTGCTGGGAAAGACCTGAGGATATGGATACCCCAAGAAATGTGTATAAAATAGATAAGAGCACCCCCGGTTCAGAAGTGGCCGCCGAAACTGCTGCTGCCCTTGCTGCTGCTTCTCTGGTTTTAAGAAGAAGCGACCCCAGATATTCTGAAATTTTGATCAGGAGGGCTATTAGGGTGTTCCAGTTTGCTGATAAATACAGGGGATCCTACAGTAATGGCTTGAAGCCCATTGTTTGCCCCTTCTATTGCTCTTACTCTGGTTATGAGGATGAGCTATTGTGGGGTGCTGCTTGGTTGCACAAGGCCACTAAAAACCCAATGTACCTACATTACATCCAAGTGAATGGACAAACCCTTGGGGCTGCAGAGTTTGACAATACCTTTGGATGGGATAACAAGCATGCCGGAGCAAGGATACTTCTTTCCAAGGAATTTCTGGTTCAAAAGGTACAGTCCCTGCATGAATACAAGGGTCATGCGGACAATTTCATCTGTTCTCTCATTCCCGGAGCTCCTTCCTCTTCATCCCAATATACCCCTGGTGGGCTTCTGTTCAAGATGAGTGATAGCAACATGCAGTATGTGACATCCTCTTCTTTCTTACTCTTAACCTATGCCAAATACTTGACCTCTTCCCACACCCTTGTCAACTGTGGTGGAATCCCTGTCACCGCTAAGAAGCTCCGAGCCATAGCCAAGAAACAGGTTGATTACTTGCTAGGAGACAACCCCTTGAAGATGTCGTACATGGTGGGGTATGGGCCAAGGTACCCACGAAGGATACACCACAGGGGTTCATCTCTACCGTCCGTTTCTGCACACCCTGCCAAGATCCAATGCTCGGCAGGGTTCGGCGTGATGAACTCACAATCCCCCAACCCTAACGTTCTAGTGGGTGCCGTTGTGGGTGGACCCGACCTCCATGACAGGTTCCCAGATAAACGGTCAGATTACGAGCAATCAGAGCCATCCACTTATATGAACGCACCCCTTGTGGGATCACTCGCCTATCTTGCACACTCATTTGGCCAACTCTAG 1320 0.4909 MTWRRDSGLSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTATMLSWSVIEFGGLMGGELQNAREAIRWATDYLLKATVHPDTIYVQVGDAKKDHACWERPEDMDTPRNVYKIDKSTPGSEVAAETAAALAAASLVLRRSDPRYSEILIRRAIRVFQFADKYRGSYSNGLKPIVCPFYCSYSGYEDELLWGAAWLHKATKNPMYLHYIQVNGQTLGAAEFDNTFGWDNKHAGARILLSKEFLVQKVQSLHEYKGHADNFICSLIPGAPSSSSQYTPGGLLFKMSDSNMQYVTSSSFLLLTYAKYLTSSHTLVNCGGIPVTAKKLRAIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPSVSAHPAKIQCSAGFGVMNSQSPNPNVLVGAVVGGPDLHDRFPDKRSDYEQSEPSTYMNAPLVGSLAYLAHSFGQL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0465 439 PANTHER ENDO-1,4-BETA-GLUCANASE 1 439 - -
Sto8g0465 439 Pfam Glycosyl hydrolase family 9 2 428 IPR001701 GO:0004553|GO:0005975
Sto8g0465 439 Gene3D - 1 435 IPR012341 GO:0005975
Sto8g0465 439 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 405 423 IPR033126 -
Sto8g0465 439 SUPERFAMILY Six-hairpin glycosidases 2 437 IPR008928 GO:0005975
Sto8g0465 439 PANTHER ENDOGLUCANASE 17 1 439 - -
Sto8g0465 439 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 332 358 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0465 Sto-Chr8 2868675 2870653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0465 1 435 Glycoside Hydrolase AT1G02800 77.011 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0465 K01179 - gmx:100777718 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0465 8 2868675 2870653 Sto13g3651 13 38709866 38711920 CCT
Sto8g0465 8 2868675 2870653 Sto8g0465 8 2868675 2870653 ECH