Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0433 ATGGCCGTCACTACCCCCTTCCCCAACGCTACCGAAAAGAAGCACTGGTGGCTTACCAACCGTAAGATTGTAGAGAAATACTTAAAAGACGCTCGCAGCCTGATTGCCACCCAAGAACAGAGCGAGGTCGCTTCGGCTCTGAACCTAGTAGACGCGGCTCTAGCCATCTCCCCACGCCTAGACCAGGCCCTGGAGCTGAAAGCCAGATGCCTCCTCTTTCTACGGCGTTTCAAGGAAGTGGCCAATATGCTTCAAGACTACATTCCAAGCCTCAAAATGGCCAACGAAGACTCCGCCTCCTTTACTTCTGATAATTCGTCTCAGCAGCTTTCGAGGGAGGGGGTTAAACTcctctcttcctcctcctcggGGGATCAGAGTTTCAAGTGCTTCTCTGTCTCGGACTTGAAGAAGAAGGTCATGGCAGGACTGTGTAAAAGTTGCGACAAGGAAGGGCAATGGAGGTACTTGGTTTTGGGTAAAGCATGCTGCCATCTCGGTCTAATGGAGGACGCAATGGTTCTTCTCCAAACAGGTAAACGACTCGCCAGCGACGCCTTCCGCCGCGAAAGCGTGTGCTGGTCCGACGATAGCTTTTCCTTATCAACCATCCCATTCTCCGGCGACACTCCACCCTCCACTCCCCCCCGAACCCTCCTCTCCGAATCCGAGAGCGTCACTCAACTTCTCAGCCATATCAAGCTCCTCCTCCGCCGTCGCACGGCGGCTCTCGCCGCCCTCGACGCCGGCCTCTACTCCGAAGCCATCCGTCACTTCTCCAAAATCGTCGACGGCCGCCGTGGCGCCCCGCAGGGATTTCTAGCCGAATGCTACATGCACAGAGCCTCCGCCTACCGCTCCGCCGGTCGAATTGCAGAGTCCATCGGCGATTGTAATCGGACTCTGGCTCTGGACCCATCTTGCATTCAAGCTCTGGATACCAGAGCTTCCCTTCTGGAAACAATTCGATGCTTGCCAGATTGCTTGCACGATCTCGAACACTTGAAGCTTTTGTACAATTCGATACTGCGGGATCGAAAGCTTGCGGGTCCTGCTTGGAAGCGTCACAACGTGAGATACAGAGAGATTCCTGGGAAACTGTGCGCTCTCACCACAAAAATTCAGGAATTGAAGCGCAGGGTTGCTTCTGGAGAAACCAGTAATGTGGATTACTATGCTCTGATTGGGCTGCGACGTGGGTGTTCTCGATCGGAGTTGGAGAGAGCTCATCTATTGCTCTGTTTACGACACAAGCCTGATAAAGCTACAAACTTTATTGATCGGTGCGAGCTTGCGGACGAAGGTGATCTGGAATCGGTTAAGGATAGGGCTAAAATGTCAGCTTTATTACTCTACAGACTTGTTCAGAAGGGTTACACTAGTGTAATGTCTACCATCATGGACGAGGAAGCTGCAGAAAAACAGAGGAAGAAAGCAGCGGCTGCATTACAGGCTGCAGAGAAATTGGGTACTAATTCTTCCATGGAGAATGATAAATCCACTGTGTCTTCTACTACTAGTACTACCACCTCCAATTCCTTGGTTTTTCAAGGAAGTTTGCTTACGCAGGCTGGGTTTAACCATCCAATTCCGGTCAAGTATGAGGCCTTGACCTGttaa 1620 0.5093 MAVTTPFPNATEKKHWWLTNRKIVEKYLKDARSLIATQEQSEVASALNLVDAALAISPRLDQALELKARCLLFLRRFKEVANMLQDYIPSLKMANEDSASFTSDNSSQQLSREGVKLLSSSSSGDQSFKCFSVSDLKKKVMAGLCKSCDKEGQWRYLVLGKACCHLGLMEDAMVLLQTGKRLASDAFRRESVCWSDDSFSLSTIPFSGDTPPSTPPRTLLSESESVTQLLSHIKLLLRRRTAALAALDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRASAYRSAGRIAESIGDCNRTLALDPSCIQALDTRASLLETIRCLPDCLHDLEHLKLLYNSILRDRKLAGPAWKRHNVRYREIPGKLCALTTKIQELKRRVASGETSNVDYYALIGLRRGCSRSELERAHLLLCLRHKPDKATNFIDRCELADEGDLESVKDRAKMSALLLYRLVQKGYTSVMSTIMDEEAAEKQRKKAAAALQAAEKLGTNSSMENDKSTVSSTTSTTTSNSLVFQGSLLTQAGFNHPIPVKYEALTC 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0433 539 MobiDBLite consensus disorder prediction 488 510 - -
Sto8g0433 539 Gene3D Tetratricopeptide repeat domain 211 355 IPR011990 GO:0005515
Sto8g0433 539 CDD DnaJ 390 424 IPR001623 -
Sto8g0433 539 PANTHER - 1 539 - -
Sto8g0433 539 SMART tpr_5 275 308 IPR019734 GO:0005515
Sto8g0433 539 SUPERFAMILY TPR-like 242 337 IPR011990 GO:0005515
Sto8g0433 539 Gene3D DnaJ domain 375 508 IPR036869 -
Sto8g0433 539 Coils Coil 469 489 - -
Sto8g0433 539 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 539 - -
Sto8g0433 539 SUPERFAMILY Chaperone J-domain 386 424 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0433 Sto-Chr8 2703518 2705821 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0433 - - zju:107426118 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0433 8 2703518 2705821 Sto13g3685 13 38889633 38892283 CCT
Sto8g0433 8 2703518 2705821 Sto8g0433 8 2703518 2705821 ECH