Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3685 ATGGCCCTCGCTACTCCCTCTCTCAGTGCTTCTGAAAGGAAGCACTGGTGGCTTACCAACCGAAAGATTGTTGAGAAATACATTAAAGACGCACGCAGCTTGATTGCCACTCAAGAACACAACGACGTGGCTTCCGCTCTCAACCTTGTAGACGCCGCATTAGCCATATCTCCACGACTAGACCAAGCGCTTGAGCTCAAAGCTAGGTCTCTTCTCTTTCTCCGCCGATACAAGGACGTCGCCGATATGCTTCAGGACTACATTCCCAGCCTTAAAATGGCAATCGAAGACTCTGCCTCTGCCTCCGCCTCCTTTTCTTCCGATACTTCTTCACAGCAGGCCAAGCTGCTCTCCTCCTCTGAGTCGCCCAGTCGGGATCAGAGTTTCAAGTGCTTCTCTGTTTCAGACTTGAAGAAGAAGGTGATGGCAGGATTGTGTAAAAATGGGGATAAGGAAGGGCAATGGAGGTACTTGGTGTTGGGGCAAGCATGCTGCCATCTGGGTCTAATGGAAGATGCAATGGTCCTTCTCCAAACCGGAAAACGCCTCGCCAGTGCCGCCTTCCGCCGCGAGAGTGTGTGCTGGTCCGATGACAGCTTCTCTTTACCCAACATCCCATTCGCCGGCGACACCACCAACGCCGAAACCGTCACCCAACTCCTAAGCCACATCAAGCTCCTCCTCCGCCGTCGTACGGCAGCCATCGCCGCCCTCGACGCCGGCCTCTATTCCGAGGCCATACGCCACTTCTCCAAAATCGTCGACGGCCGCCGTGGCGCCCCACAAGGCTTTCTGGCGGAATGCTACATGCACAGAGCCTCTGCCTACCGTTCCGCTGGTCGAATTGCAGAGGCCATTGCCGATTGCAATCGCACTCTGGCTTTAGACCCCACTTGCATTCAAGCTCTTGATACCAGAGCTTCGCTTCTAGAAACCATTAGATGCTTGCCTGATTGTCTGCACGATCTTGAACACTTGAAGTTACTCTACAATACAATCTTGCGGGATCGCAAGCTTCCGGGTTCTGCTTGGAAGCGTCACAACGTGAGATACAGAGAGATTCCTGGGAAACTCTGTGCCCTCACCACTAAAATTCAAGAATTGAAGCAAAGAGTGGCTTCTGGGGAGACCCGTAATGTGGATTACTACGCTTTGATTGGATTGCGACGTGGGTGTTCTCGATCGGAGTTGGAGAGAGCTCACTTGTTGCTCTGTTTACGACACAAGCCTGATAAAGCAATTAGTTTCATTGACCGATGCGAACTTGCGGACGAACGTGATCTTGAATCGGTGAAGGACAGAGCAAGAATGTCGGGTTTGTTGTTGTATAGGTTACTTCAGAAGGGTTACACAAGTTTGATGGGTACGATCATAGAGGAAGAAGCTGCTGAGAAACAGAGGAAGAATACAAGTGAGTCGAGATTGGAATATGATGTGAATAAATCAGACAACAATTTGGGAAGTAAAATGGAAAGCAAATCCGCAGTATCTTCGTCCACTGTGAATCCGTCGGTATTCCAGGGTGTGTTTTGCCGTGATCTTGCTGTGGTTGGGAGTTTGCTTTCACAAGTGAGATTCAATCGTCCTATTCCAGTCAAGTATGAGGCATTGAGTTGCTGA 1620 0.5043 MALATPSLSASERKHWWLTNRKIVEKYIKDARSLIATQEHNDVASALNLVDAALAISPRLDQALELKARSLLFLRRYKDVADMLQDYIPSLKMAIEDSASASASFSSDTSSQQAKLLSSSESPSRDQSFKCFSVSDLKKKVMAGLCKNGDKEGQWRYLVLGQACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSDDSFSLPNIPFAGDTTNAETVTQLLSHIKLLLRRRTAAIAALDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRASAYRSAGRIAEAIADCNRTLALDPTCIQALDTRASLLETIRCLPDCLHDLEHLKLLYNTILRDRKLPGSAWKRHNVRYREIPGKLCALTTKIQELKQRVASGETRNVDYYALIGLRRGCSRSELERAHLLLCLRHKPDKAISFIDRCELADERDLESVKDRARMSGLLLYRLLQKGYTSLMGTIIEEEAAEKQRKNTSESRLEYDVNKSDNNLGSKMESKSAVSSSTVNPSVFQGVFCRDLAVVGSLLSQVRFNRPIPVKYEALSC 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3685 539 SUPERFAMILY TPR-like 233 327 IPR011990 GO:0005515
Sto13g3685 539 PANTHER - 5 539 - -
Sto13g3685 539 ProSiteProfiles TPR repeat profile. 266 299 IPR019734 GO:0005515
Sto13g3685 539 SMART tpr_5 266 299 IPR019734 GO:0005515
Sto13g3685 539 SUPERFAMILY Chaperone J-domain 377 415 IPR036869 -
Sto13g3685 539 MobiDBLite consensus disorder prediction 469 491 - -
Sto13g3685 539 CDD DnaJ 381 413 IPR001623 -
Sto13g3685 539 Gene3D Tetratricopeptide repeat domain 210 343 IPR011990 GO:0005515
Sto13g3685 539 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 5 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3685 Sto-Chr13 38889633 38892283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3685 - - gmx:100800231 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0433 8 2703518 2705821 Sto13g3685 13 38889633 38892283 CCT
Sto13g3685 13 38889633 38892283 Sto13g3685 13 38889633 38892283 ECH