Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0430 CTGGGACTGCACACCGAGGATGCCATAAAGAAGGGGTTATTAAGCGAAGCTGATGTGAACGGTGCTTTGGCAAATACTCTCTCAGTCCAAATGAGACTAGGCATGTTTGATGGAGAGCCATCGGCCCAACCCTATGGGAACTTGGGCCCAGCAGATGTCTGCACGCCGGCCCACCAAGAGCTAGCCCACGAAGCTGCTGTACAGGGAATTGTACTACTTAAAAACACTGGACCTTCTTTGCCCATTTCCCAACGTCGTCATCGCACTGTGGCTGTAATTGGCCCCAATTCTGACGTCACTCTCACCATGATTGGCAACTATGCTGGCGTTGCATGTGGATACACCTCTCCCTTACAAGGAATAGCGAGATACGCCAAGACAACAATTCATGAATTAGGGTGTTTGAATGTGGCCTGCACCGATGACAAACTATTCGGAGCAGCTATTGGGGCAGCTCGTGAAGCAGATGCGACGGTTTTAGTGATGGGCCTGGACCAATCCCTTGAGGCTGAAACCGTAGACAGAACTGGCCTGCTTCTGCCAGGGCGTCAACAAGATCTTATTACAAAGGTGGCAGCCGCATCTAAGGGCCCAACTATTCTGGTCTTGATGTCGGGTGGGCCTCTTGATATCACTTTCGCAAAGAATAACCCACGTGTTGCAGGCATATTATGGGCCGGGTATCCAGGCCAAGCCGGTGGAGCAGCCATTGCAGATATCTTGTTCGGAGCCGCCAACCCAGgaGGTAAGCTGCCAATGACATGGTACCCACAAGAGTATCTTACAAACTTGGCAATGACAAATATGGAAATGCGAGCAAACCGAGGCACTGGGTATCCAGGAAGAACATACCGATTCTATGAGGGTCCAGTGGTGTACCCATTTGGGCACGGGTTAACGTACACCCACTTTGTGCACACATTGGCCAATGCACCGACGGTGGTGTCAGTGCCTGTGGATGGGCACCGCCGTTCGAATATCACAAGCATTTCAAACAAAGCAATCAGGGTGACACATGCAAGATGTGGTAAACTGTCGATAAGCCTTCATGTGGACGTTCAGAATGTGGGTTCCAAAGACGGGACTCACACGGTGCTAGTATTCTCGGCACCGCCTAGTGGCGGTCCTTGGGCCCCACGGAAGCAGCTGGTGGCATTTGAGAAGGTACATGTCGCAGCCAAGGCTTCACAGCGAGTCCAAGTCAATATTCACGTGTGCAAGTTGCTGAGTGTGGTGGACAGATCTGGCATTCGCAGAATTCCAATGGGCCAACACAGTCTTCACATTGGGGATGTCAAGCACTTCCTATCGCTTCAAGCCCAAGCCCTAGGGATCATCAAGTCCTGA 1347 0.5152 LGLHTEDAIKKGLLSEADVNGALANTLSVQMRLGMFDGEPSAQPYGNLGPADVCTPAHQELAHEAAVQGIVLLKNTGPSLPISQRRHRTVAVIGPNSDVTLTMIGNYAGVACGYTSPLQGIARYAKTTIHELGCLNVACTDDKLFGAAIGAAREADATVLVMGLDQSLEAETVDRTGLLLPGRQQDLITKVAAASKGPTILVLMSGGPLDITFAKNNPRVAGILWAGYPGQAGGAAIADILFGAANPGGKLPMTWYPQEYLTNLAMTNMEMRANRGTGYPGRTYRFYEGPVVYPFGHGLTYTHFVHTLANAPTVVSVPVDGHRRSNITSISNKAIRVTHARCGKLSISLHVDVQNVGSKDGTHTVLVFSAPPSGGPWAPRKQLVAFEKVHVAAKASQRVQVNIHVCKLLSVVDRSGIRRIPMGQHSLHIGDVKHFLSLQAQALGIIKS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0430 448 Gene3D - 56 302 IPR036881 GO:0004553|GO:0005975
Sto8g0430 448 SUPERFAMILY (Trans)glycosidases 5 69 IPR017853 -
Sto8g0430 448 Pfam Fibronectin type III-like domain 363 431 IPR026891 -
Sto8g0430 448 Pfam Glycosyl hydrolase family 3 C-terminal domain 70 301 IPR002772 GO:0004553|GO:0005975
Sto8g0430 448 Gene3D Immunoglobulins 326 444 IPR013783 -
Sto8g0430 448 SMART Fn3_like_2 363 433 IPR026891 -
Sto8g0430 448 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 70 304 IPR036881 GO:0004553|GO:0005975
Sto8g0430 448 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 1 444 - -
Sto8g0430 448 PANTHER SUGAR HYDROLASE-RELATED 1 444 IPR044993 GO:0009044|GO:0045493
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0430 Sto-Chr8 2679759 2681327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0430 1 448 Glycoside Hydrolase AT1G02640 69.420 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0430 - - gmx:100778624 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0430 8 2679759 2681327 Sto13g3687 13 38901230 38903907 CCT
Sto8g0430 8 2679759 2681327 Sto8g0430 8 2679759 2681327 ECH