Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3687 atgggGTCCCTCTCATCCCTCATTACGGTGTTGCTTGTGATGCTAGTGGTGGGGGCAGCAGGCGATCCATTTGCGTGTGACGAGAAGAACGCAAGCACGAGGGCGTTGGCGTTTTGCCGGGTGTCGGTGCCTATAGCAGAGAGAGTGAAGGACCTGATCGGAAGGTTGACGCTGGAAGAGAAGGTTAGGCTGTTGGTGAACAATGCGGCGGCGGTTCCACGCCTTGGGATCAAAGGCTATGAGTGGTGGTCAGAAGCACTTCACGGCGTTTCCAATGTGGGCCCCGGCACTAAGTTCGCTCCTCCATTCCCTGCAGCCACGAGCTTCCCTCAAGTCATCACTACCGCTGCTTCCTTCAACGCCTCCTTGTGGGAGGCCATTGGACGGGTAGTGTCAGACGAAGGAAGAGCAATGTATAACGGAGGAAAGGCAGGGCTAACGTTCTGGAGTCCAAACGTGAACATACTGAGGGACCCAAGGTGGGGACGCGGACAGGAGACTCCCGGTGAAGACCCAGTTGTAGTGGGTAAATATGCTGCCCATTATGTGAGAGGGCTACAGGGAACTGATGGCAGCCGGTTGAAGGTAGCTGCTTGTTGTAAGCACTTTACGGCTTATGACCTTGATAATTGGAATGGGGTGGATCGCTTCCACTTTAATGCACAAGTAAGCAAGCAGGACATAGAGGAGACGTTCGATGTGCCATTTAGAATGTGTGTCAAGGAAGGAAATGTGGCGAGTGTGATGTGCTCTTACAATCAGGTGAATGGGAAGCCCACGTGTGCCGACCCCAACCTCCTCAAGGGAACAGTTCGTGGCCAATGGCATCTGGATGGCTACATCGTCTCCGACTGTGACTCCGTTGGTGTCTTCTTCTCCAACCAACATTATACCTCCACCCCTGAAGAGGCTGCTGCTGATGCCATCAAAGCAGGTTTGGATTTGGACTGTGGGCCCTTCCTAGCATTGCACACTCAGGACGCCGTCAAAAAGGGCTTGCTAACCGAGGCCCACGTCAATGGTGCTTTGGTAAATACACTCACAGTCCAAATGAGATTAGGCATGTTCGACGGAGAGCCATCGGCTCAACCATATGGCCACTTGGGTCCAACAGATGTATGCACCCCCGCTCATCAGGACCTTGCCCACCAAGCTGCCACACAGGGAATCGTCCTACTTAAGAACGCCGGCCCTTCTTTGCCTCTCTCCCCACGTCGTCATCGCACTGTTGCCGTCATTGGCCCCAATTCTAACGTTACTGTTACCATGATTGGTAACTATGCAGgtATTGCTTGTGGATACACCAGTCCCTTACAAGGAATAGGGAAATATGCGAGCACCATTCACCAGATGGGTTGTGTGAACGTGGCTTGTGCTGATGACAAACAATTTGGAGGGGCTGTAAATGCTGCTCGTCAAGCCGATGCCACCATTTTAGTGATGGGCCTAGACCAGTCCATTGAGGCCGAGACCGTGGATAGGACTAGTTTGCTTCTTCCTGGCCATCAACAAGACCTCGTTTCAAAAGTTGCAGCAGCCTCTAAGGGCCCAACTATTCTGGTCCTGATGTCTGGTGGGCCCGTTGATGTCACTTTCGCTAAGAATAATCCTCGCGTGGATGCCATATTATGGGCCGGATACCCAGGCCAAGCTGGCGGTGCTGCCATTGCGGATATCTTGTTTGGATCTGCCAACCCAGGTGGGAAGCTGCCTATGACATGGTATCCAGAAGAATACCTGAGGAACCTGCCAATGACGAATATGGCAATGAGAGGAAGCGAATCAAAAGGATACCCAGGAAGAACTTATCGATTTTACAAGGGTGCAGTGGTGTACCCGTTTGGGTACGGATTAAGCTACACCCAGTTTGTTCACACATTGGCTGGTGCGCCGAAGGTTGTATCAGTTCCGGTGGATGGGCATCGGCATGGGAATAGCAGCAACATGTCAAACAAGGCAATTAGAGTGACGCATGCGAGATGTGGTAAGCTGTCCATGAGGGTACACGTGGATGTGAAAAACGCGGGGTCCATGGACGGCACTCACACATTGTTAGTGTTCTCGACACCACCTGCAGGTGGTGGCGATTGGGCTCCCCACAAGCAACTGGTGGCGTTTGAGAAAGTGCACGTTGCTGCCAAATCTCAGGAACGAGTGCGACTCAATATTCATGTGTGCAAGTTGCTAAGTGTTGTGGACAAATCTGGGATTAGGAGGATTCCAATGGGTGAACATAGTCTTCACATTGGAGATGTCAAACACTCTGTTTCGCTTCAACCTGCAACTCTCGGGAACGGGATTATCAACTCTTGA 2313 0.5184 MGSLSSLITVLLVMLVVGAAGDPFACDEKNASTRALAFCRVSVPIAERVKDLIGRLTLEEKVRLLVNNAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFAPPFPAATSFPQVITTAASFNASLWEAIGRVVSDEGRAMYNGGKAGLTFWSPNVNILRDPRWGRGQETPGEDPVVVGKYAAHYVRGLQGTDGSRLKVAACCKHFTAYDLDNWNGVDRFHFNAQVSKQDIEETFDVPFRMCVKEGNVASVMCSYNQVNGKPTCADPNLLKGTVRGQWHLDGYIVSDCDSVGVFFSNQHYTSTPEEAAADAIKAGLDLDCGPFLALHTQDAVKKGLLTEAHVNGALVNTLTVQMRLGMFDGEPSAQPYGHLGPTDVCTPAHQDLAHQAATQGIVLLKNAGPSLPLSPRRHRTVAVIGPNSNVTVTMIGNYAGIACGYTSPLQGIGKYASTIHQMGCVNVACADDKQFGGAVNAARQADATILVMGLDQSIEAETVDRTSLLLPGHQQDLVSKVAAASKGPTILVLMSGGPVDVTFAKNNPRVDAILWAGYPGQAGGAAIADILFGSANPGGKLPMTWYPEEYLRNLPMTNMAMRGSESKGYPGRTYRFYKGAVVYPFGYGLSYTQFVHTLAGAPKVVSVPVDGHRHGNSSNMSNKAIRVTHARCGKLSMRVHVDVKNAGSMDGTHTLLVFSTPPAGGGDWAPHKQLVAFEKVHVAAKSQERVRLNIHVCKLLSVVDKSGIRRIPMGEHSLHIGDVKHSVSLQPATLGNGIINS 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3687 770 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 390 623 IPR036881 GO:0004553|GO:0005975
Sto13g3687 770 Gene3D - 376 621 IPR036881 GO:0004553|GO:0005975
Sto13g3687 770 Pfam Fibronectin type III-like domain 683 751 IPR026891 -
Sto13g3687 770 Pfam Glycosyl hydrolase family 3 C-terminal domain 390 620 IPR002772 GO:0004553|GO:0005975
Sto13g3687 770 Gene3D Immunoglobulins 645 764 IPR013783 -
Sto13g3687 770 PRINTS Glycosyl hydrolase family 3 signature 109 128 IPR001764 GO:0004553|GO:0005975
Sto13g3687 770 PRINTS Glycosyl hydrolase family 3 signature 196 212 IPR001764 GO:0004553|GO:0005975
Sto13g3687 770 PRINTS Glycosyl hydrolase family 3 signature 270 288 IPR001764 GO:0004553|GO:0005975
Sto13g3687 770 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 4 761 - -
Sto13g3687 770 PANTHER SUGAR HYDROLASE-RELATED 4 761 IPR044993 GO:0009044|GO:0045493
Sto13g3687 770 SUPERFAMILY (Trans)glycosidases 37 389 IPR017853 -
Sto13g3687 770 Pfam Glycosyl hydrolase family 3 N terminal domain 105 345 IPR001764 GO:0004553|GO:0005975
Sto13g3687 770 Gene3D - 48 364 IPR036962 GO:0004553|GO:0005975
Sto13g3687 770 SMART Fn3_like_2 682 753 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3687 Sto-Chr13 38901230 38903907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3687 6 764 Glycoside Hydrolase AT1G02640 73.953 0.0 1182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3687 - - gmx:100798630 1290.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0430 8 2679759 2681327 Sto13g3687 13 38901230 38903907 CCT
Sto13g3687 13 38901230 38903907 Sto13g3687 13 38901230 38903907 ECH